| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G214200.2 |
| Family | GT48 |
| Protein Properties | Length: 1923 Molecular Weight: 221093 Isoelectric Point: 8.9439 |
| Chromosome | Chromosome/Scaffold: 03 Start: 21168881 End: 21184513 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1073 | 1828 | 0 |
| VPSNLEARRRISFFSNSLFMDMPAAPKVRNMLSFSVLTPYYTEEVLFSLHDLEEPNEDGVSILFYLQKIFPDEWNHFLERVNCTGEEELKERDDLEELRL WASYRGQTLTRTVRGMMYYRHALELQAFLDIAKHEDLMEGYKAIELNTEDQSKGGSSLLAECQAVADMKFTYVVSCQQYGIHKRSGDLRAQDILRLMTTY PSLRVAYIDEVEETNPDKSKKVIQKVYYSSLVKAALPKSIDSSEPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALK MRNLLQEFLKKPDGVRHPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNS TLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLST QKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFLLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYR LYSRSHFVKGIEMMILLVVYQIFGQPYRSAVAYVLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWSDWNKWISNRGGIGVPPEKSWESWWEEEQEHL RHSGKRGIVAEILLSLRFFIYQYGLVYHLTITKKMKDRSFLIYGISWLVILLILFV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1923 Download |
| MASTSRGGGG GGGMGMDQAA AGVGTGATPP PTQRRITRTQ TAGNLGESVF DSEIVPSSLF 60 EIAPILRVAN EVETSNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENDP 120 TLMGRVKKSD AREMQGFYQH YYKKYIQALH NAADKADRAQ LTKAYQTANV LFEVLKAVNM 180 TQSIEVDREI LEAQDEVAEK TQIYLPYNIL PLDPDSADQA IMRYPEIQAA VLALRNTRGL 240 PWPKDYKKKT DEDVLDWLQA MFGFQKDNVA NQREHLILLL ANVHMRQFVK PDQQPKLDER 300 ALTEVMKKLF KNYKKWCKYL DRKSSLWLPT IQQEVQQRKL LYMGLYLLIW GEAANLRFMP 360 ECLCYIYHHM AFELYGMLAG NVSPMTGENV KPAYGGEEEA FLRKVVTPIY NVIAKEAERS 420 KKGKSKHSQW RNYDDINEYF WSVDCFRLGW PMRADADFFC LSSEQLRFVQ NGDDKPAYRD 480 RWVGKVNFVE IRTFWHVFRS FDRMWSFFIL CLQAMIIVAW NGSGKLSAIF SGDVFKKVLS 540 VFITAAILKL GQAILDVILS WKARQIMSFH VKLRYILKVV SAAAWVVVLP VTYAYTWKEN 600 PPGFAQTIKG WFGNSSSSSS LFVLAVVIYL APNMLAALLF LFPFIRRFLE RSDYRIVMFM 660 MWWSQPRLYV GRGMHESTIS LFKYTMFWVL LIVTKLAFSY YIEIKPLVDP TKAIMDVHIT 720 AFQWHEFFPQ AKNNIGVVIA LWAPIILVYF MDAQIWYAIF STLFGGIYGA FRRLGEIRTL 780 GMLRSRFQSL PGAFNACLIP DEKSERKKKS LKARFSRNFN ENPPNKDTEA PRFAQLWNKI 840 ISSFREEDLI SNREMDLLLV PYWADRDLGV LGLTQWPPFL LASKIPIALD MAKDSNGKDK 900 ELKKRIEADN YMSCAVCECY ASFKNIIKFL VQGRPETEVI DSIFVDVENH IKQGDLIKDY 960 KMSALPLLYD HLVKLIKCLV DNRPEDRDQV VILFQDMLEV VTRDIMEDQI SSLVDSIPDG 1020 SGYEGMKPLE QQYQLFASAG AIKFPIEPET EAWKEKIKRL YLLLTTKESA MDVPSNLEAR 1080 RRISFFSNSL FMDMPAAPKV RNMLSFSVLT PYYTEEVLFS LHDLEEPNED GVSILFYLQK 1140 IFPDEWNHFL ERVNCTGEEE LKERDDLEEL RLWASYRGQT LTRTVRGMMY YRHALELQAF 1200 LDIAKHEDLM EGYKAIELNT EDQSKGGSSL LAECQAVADM KFTYVVSCQQ YGIHKRSGDL 1260 RAQDILRLMT TYPSLRVAYI DEVEETNPDK SKKVIQKVYY SSLVKAALPK SIDSSEPVQN 1320 LDQVIYRIKL PGPAILGEGK PENQNHAIIF TRGEGLQTID MNQDNYMEEA LKMRNLLQEF 1380 LKKPDGVRHP SILGLREHIF TGSVSSLAWF MSNQETSFVT IGQRLLANPL KVRFHYGHPD 1440 VFDRLFHLTR GGVSKASKVI NLSEDIFAGF NSTLREGNVT HHEYIQVGKG RDVGLNQISM 1500 FEAKIANGNG EQTLSRDIYR LGHRFDFFRM LSCYFTTVGF YFSTLITVLT VYVFLYGRLY 1560 LVLSGLEEGL STQKAIRDNK PLQVALASQS FVQIGFLMAL PMLMEIGLER GFRTALSEFL 1620 LMQLQLAPVF FTFSLGTKTH YYGRTLLHGG AKYRSTGRGF VVFHAKFADN YRLYSRSHFV 1680 KGIEMMILLV VYQIFGQPYR SAVAYVLITI SMWFMVGTWL FAPFLFNPSG FEWQKIVDDW 1740 SDWNKWISNR GGIGVPPEKS WESWWEEEQE HLRHSGKRGI VAEILLSLRF FIYQYGLVYH 1800 LTITKKMKDR SFLIYGISWL VILLILFVMK TVSVGRRKFS ANFQLVFRLI KGMIFLTFVS 1860 ILVTLIALPH MTVQDVIVCI LAFMPTGWGM LLVSGTFICF RANLCHCSRH LLHLSLNHGA 1920 YL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 5.0e-11 | 62 | 176 | 126 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 9.0e-60 | 337 | 453 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1073 | 1835 | 838 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 34 | 1875 | 17 | 1849 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283298.1 | 0 | 34 | 1875 | 17 | 1848 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 14 | 1894 | 1 | 1860 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304888.1 | 0 | 14 | 1894 | 1 | 1881 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 19 | 1894 | 3 | 1875 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
