Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G224200.1 |
Family | AA1 |
Protein Properties | Length: 526 Molecular Weight: 59009.1 Isoelectric Point: 9.087 |
Chromosome | Chromosome/Scaffold: 03 Start: 21783965 End: 21785986 |
Description | SKU5 similar 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 13 | 460 | 0 |
IPQQVILVNNQFPGPNINSTTNNNIVLNVFNNLDEPFLLTWSCVQQRKNSWQDGVLGTNCPIPPRTNYTYHFQVKDQIGSYIYYPTTGMHRAAGGFGGLR VNSRLLIPVPYVDPEDDYTVILNDWYTSSHSTLRKYLDSGRSLARPNGVLINGKNAKGDGNDEPLFTMKPGKTYKYRICNAGLKNTLNFRIQGHTMKLVE MEGSHVVQNVYEPLDVHVGQCFSVLEVLTSKGIIRYTNGKGPASPELPEAPVGWAWSLNQFRSFHWNLTASAARPNPQGSYHYGSINITRTIKLVNSASR AGGKLCYAINGVSHVNPETPLKLAEYYGIAHKVFKYDTIPDMPLANIASAKVVTHPNVINQTFRNFVEIVFENHEKSMQSYHLDGYSFFALYTNIHNIEP DTWTPEKRKSYNLLDAVSRTTIQVFPKSWAAILLTFDNAGMWNIRSEM |
Full Sequence |
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Protein Sequence Length: 526 Download |
MTRVILMVSK LPIPQQVILV NNQFPGPNIN STTNNNIVLN VFNNLDEPFL LTWSCVQQRK 60 NSWQDGVLGT NCPIPPRTNY TYHFQVKDQI GSYIYYPTTG MHRAAGGFGG LRVNSRLLIP 120 VPYVDPEDDY TVILNDWYTS SHSTLRKYLD SGRSLARPNG VLINGKNAKG DGNDEPLFTM 180 KPGKTYKYRI CNAGLKNTLN FRIQGHTMKL VEMEGSHVVQ NVYEPLDVHV GQCFSVLEVL 240 TSKGIIRYTN GKGPASPELP EAPVGWAWSL NQFRSFHWNL TASAARPNPQ GSYHYGSINI 300 TRTIKLVNSA SRAGGKLCYA INGVSHVNPE TPLKLAEYYG IAHKVFKYDT IPDMPLANIA 360 SAKVVTHPNV INQTFRNFVE IVFENHEKSM QSYHLDGYSF FALYTNIHNI EPDTWTPEKR 420 KSYNLLDAVS RTTIQVFPKS WAAILLTFDN AGMWNIRSEM WERTYLGQQL YVSVLCPGCS 480 LKDEYNVPDN ALLCGQVKDL PKPNHTPYKS SSRSIPSDTV VSSKG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 6.0e-168 | 15 | 498 | 516 | + copper ion binding / pectinesterase | ||
PLN02792 | PLN02792 | 2.0e-172 | 8 | 507 | 522 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 8 | 505 | 518 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 8 | 496 | 511 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 8 | 496 | 509 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002297609.1 | 0 | 8 | 503 | 38 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299087.1 | 0 | 9 | 503 | 39 | 546 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
RefSeq | XP_002303974.1 | 0 | 8 | 508 | 38 | 551 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523381.1 | 0 | 8 | 503 | 38 | 546 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002523382.1 | 0 | 8 | 503 | 38 | 546 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 6e-40 | 17 | 495 | 24 | 539 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asq_A | 6e-40 | 17 | 495 | 24 | 539 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asp_B | 6e-40 | 17 | 495 | 24 | 539 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asp_A | 6e-40 | 17 | 495 | 24 | 539 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1aso_B | 6e-40 | 17 | 495 | 24 | 539 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG020403 | 341 | 78 | 398 | 0 |
JG074571 | 319 | 204 | 502 | 0 |
CO118359 | 307 | 67 | 353 | 0 |
JG076426 | 323 | 206 | 508 | 0 |
JG074541 | 330 | 207 | 513 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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