y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G040700.1 |
Family | GH1 |
Protein Properties | Length: 517 Molecular Weight: 58441.3 Isoelectric Point: 8.7634 |
Chromosome | Chromosome/Scaffold: 04 Start: 3109290 End: 3113144 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 34 | 515 | 0 |
RKSFPQDFVFGVASSAYQYEGAAFEDGKGPSIWDAYTHKFPSKISNGSNGDVALDSYHRYKEDVQIIKKMGFDFYRFSISWPRILPKGKKCGGVNQKGIN YYNNLINELLANGIKPFVTLFHWDLPQALEDEYGGFLSDRIVNDYQDYAKICFENFGDRVKHWITLNEPTMFTMQGYIAGMFPPGRCSAWIGKNCTGGDS GAEPYMVSHNQILAHAAAVKLYRTRFQAKQKGKIGITLQTNWFVPLSNAKEDLEAVSRALDFNLGWFMSPLTSGEYPSSMRSLVGERLPKFSKKQAGSIK GSFDFIGLNYYSANYVAHKSQSNDTHRSYETDSHVASFCKNEQLQDVERDGIPIGPKAGSFWLLVYPSGLHDLLVYIKKAYNDPVIYITENGVDETDNPR LPLKDALIDNQRIDYFHQHLSFVQKAIKDGVKVKGYFAWSLMDGFEWVVGYTSRFGLNYIDHKDGLKRHPKLSAQWFTKFLK |
Full Sequence |
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Protein Sequence Length: 517 Download |
MAIQSYLLLS LLLVFGSCFN SLAATQGDTA SFNRKSFPQD FVFGVASSAY QYEGAAFEDG 60 KGPSIWDAYT HKFPSKISNG SNGDVALDSY HRYKEDVQII KKMGFDFYRF SISWPRILPK 120 GKKCGGVNQK GINYYNNLIN ELLANGIKPF VTLFHWDLPQ ALEDEYGGFL SDRIVNDYQD 180 YAKICFENFG DRVKHWITLN EPTMFTMQGY IAGMFPPGRC SAWIGKNCTG GDSGAEPYMV 240 SHNQILAHAA AVKLYRTRFQ AKQKGKIGIT LQTNWFVPLS NAKEDLEAVS RALDFNLGWF 300 MSPLTSGEYP SSMRSLVGER LPKFSKKQAG SIKGSFDFIG LNYYSANYVA HKSQSNDTHR 360 SYETDSHVAS FCKNEQLQDV ERDGIPIGPK AGSFWLLVYP SGLHDLLVYI KKAYNDPVIY 420 ITENGVDETD NPRLPLKDAL IDNQRIDYFH QHLSFVQKAI KDGVKVKGYF AWSLMDGFEW 480 VVGYTSRFGL NYIDHKDGLK RHPKLSAQWF TKFLKK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 1.0e-136 | 19 | 515 | 499 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-140 | 34 | 512 | 486 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 1.0e-140 | 31 | 515 | 491 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-157 | 38 | 510 | 477 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-180 | 33 | 516 | 490 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY48758.1 | 0 | 28 | 516 | 26 | 506 | glycosylhydrolase 1 [Leucaena leucocephala] |
DDBJ | BAG13451.1 | 0 | 1 | 515 | 1 | 531 | beta-glucosidase [Rosa hybrid cultivar] |
RefSeq | XP_002285582.1 | 0 | 1 | 516 | 1 | 509 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285585.1 | 0 | 29 | 516 | 33 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305150.1 | 0 | 1 | 516 | 1 | 516 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 19 | 516 | 1 | 490 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 8 | 516 | 5 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 8 | 516 | 5 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 8 | 516 | 5 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 8 | 516 | 5 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |