Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G040700.3 |
Family | GH1 |
Protein Properties | Length: 407 Molecular Weight: 46318.8 Isoelectric Point: 9.2717 |
Chromosome | Chromosome/Scaffold: 04 Start: 3109290 End: 3112497 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 1 | 405 | 0 |
MGFDFYRFSISWPRILPKGKKCGGVNQKGINYYNNLINELLANGIKPFVTLFHWDLPQALEDEYGGFLSDRIVNDYQDYAKICFENFGDRVKHWITLNEP TMFTMQGYIAGMFPPGRCSAWIGKNCTGGDSGAEPYMVSHNQILAHAAAVKLYRTRFQAKQKGKIGITLQTNWFVPLSNAKEDLEAVSRALDFNLGWFMS PLTSGEYPSSMRSLVGERLPKFSKKQAGSIKGSFDFIGLNYYSANYVAHKSQSNDTHRSYETDSHVASFFERDGIPIGPKAGSFWLLVYPSGLHDLLVYI KKAYNDPVIYITENGVDETDNPRLPLKDALIDNQRIDYFHQHLSFVQKAIKDGVKVKGYFAWSLMDGFEWVVGYTSRFGLNYIDHKDGLKRHPKLSAQWF TKFLK |
Full Sequence |
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Protein Sequence Length: 407 Download |
MGFDFYRFSI SWPRILPKGK KCGGVNQKGI NYYNNLINEL LANGIKPFVT LFHWDLPQAL 60 EDEYGGFLSD RIVNDYQDYA KICFENFGDR VKHWITLNEP TMFTMQGYIA GMFPPGRCSA 120 WIGKNCTGGD SGAEPYMVSH NQILAHAAAV KLYRTRFQAK QKGKIGITLQ TNWFVPLSNA 180 KEDLEAVSRA LDFNLGWFMS PLTSGEYPSS MRSLVGERLP KFSKKQAGSI KGSFDFIGLN 240 YYSANYVAHK SQSNDTHRSY ETDSHVASFF ERDGIPIGPK AGSFWLLVYP SGLHDLLVYI 300 KKAYNDPVIY ITENGVDETD NPRLPLKDAL IDNQRIDYFH QHLSFVQKAI KDGVKVKGYF 360 AWSLMDGFEW VVGYTSRFGL NYIDHKDGLK RHPKLSAQWF TKFLKK* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02998 | PLN02998 | 3.0e-109 | 1 | 405 | 407 | + beta-glucosidase |
PLN02814 | PLN02814 | 2.0e-109 | 1 | 405 | 418 | + beta-glucosidase |
PLN02849 | PLN02849 | 4.0e-110 | 2 | 405 | 405 | + beta-glucosidase |
TIGR03356 | BGL | 2.0e-117 | 1 | 400 | 404 | + beta-galactosidase. |
pfam00232 | Glyco_hydro_1 | 6.0e-140 | 1 | 406 | 412 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY48758.1 | 0 | 1 | 406 | 101 | 506 | glycosylhydrolase 1 [Leucaena leucocephala] |
GenBank | ABY84677.1 | 0 | 1 | 406 | 4 | 409 | coniferrin beta glucosidase [Leucaena leucocephala] |
RefSeq | XP_002285582.1 | 0 | 1 | 406 | 104 | 509 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285585.1 | 0 | 1 | 406 | 107 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305150.1 | 0 | 1 | 406 | 103 | 516 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 406 | 100 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 1 | 406 | 100 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 1 | 406 | 100 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 1 | 406 | 100 | 505 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptk_B | 0 | 1 | 406 | 100 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG227815 | 406 | 2 | 405 | 0 |
EE590590 | 406 | 1 | 406 | 0 |
HO779715 | 395 | 1 | 395 | 0 |
HO794849 | 395 | 1 | 395 | 0 |
HO777739 | 403 | 1 | 403 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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