y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.004G081300.1 |
Family | GT4 |
Protein Properties | Length: 836 Molecular Weight: 95139.3 Isoelectric Point: 7.191 |
Chromosome | Chromosome/Scaffold: 04 Start: 6705500 End: 6709825 |
Description | sucrose synthase 6 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 557 | 724 | 0 |
EDKKKPIIFSMARLDTVKNLTGLTEWYGKNKRLRGLVNLVIVGGFFDPNKSKDREEMAEITKMHGLIKKYRLNGQFRWIAAQTDRNRNGELYRCIADTKG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHIDPQNGDESSNIIADFFEKCKVD |
Full Sequence |
---|
Protein Sequence Length: 836 Download |
MATLKRSDSI ADNMPEALKQ SRYHMKRCFA KYIEKGRRTM KLQQLLDEME NVIDDQVERT 60 RVLQGLLGDI WFSIQEAVVN PPYVALSIRP SPGFWEFVKV NSADLSVEGI TATDYLKFKE 120 MIYDENWAKD ANALEVDFGA FDFSVPHLTL SSSIGNGLGF VSKFATSKLS GRLESAQPLV 180 DYLLSLNHEG EKLMINETLS SVRKLRMALI VAEAYLSGLP KDTQYQNFET SFKAWGFEKG 240 WGNTAERVKE TMRCLSEVLQ APDPLNMENF FSRLPTVFNV VIFSPHGYFG QADVLGLPDT 300 GGQVVYILDQ VKALEDELLL RIEQQGLNIK PQIVVVTRLI PEARGTKCNQ ELESINGTKH 360 SNILRVPFSI ENKVLRQWVS RFDDVITKLL DLMQRKPDLI IGNYTDGNLA ATLMASKLGI 420 TQATIAHALE KTKYENSDVK WKELDPKYHF SCQFMADTIA MNATDFIIAS TYQEIAGSKD 480 RPGQYESHAS FTLPGLCRVV SGIDVFDPKF NIAAPGADQS VYFPYTEKQS RFTKFHPAIE 540 ELLYSKVVND EHIGYLEDKK KPIIFSMARL DTVKNLTGLT EWYGKNKRLR GLVNLVIVGG 600 FFDPNKSKDR EEMAEITKMH GLIKKYRLNG QFRWIAAQTD RNRNGELYRC IADTKGAFVQ 660 PALYEAFGLT VIEAMNCGLP TFATNQGGPA EIIVDGISGF HIDPQNGDES SNIIADFFEK 720 CKVDPGYWNK FAAEGLKRIN ECYTWKIYAK KLLNMGNMYS FWRQLNKEQK LAKQRYIQML 780 YNLQFRRLVV WSLSCNQEAW IRTAIILCHL TLLNMFIHNV FYLLLSEFNF SVYDH* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 7.0e-60 | 280 | 755 | 488 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-114 | 279 | 753 | 479 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 789 | 799 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 22 | 788 | 778 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 6 | 545 | 551 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27338.1 | 0 | 3 | 789 | 6 | 809 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002267020.1 | 0 | 3 | 789 | 6 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305240.1 | 0 | 1 | 788 | 1 | 788 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327452.1 | 0 | 1 | 789 | 1 | 789 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532791.1 | 0 | 2 | 789 | 6 | 771 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 4 | 788 | 8 | 798 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3s29_G | 0 | 4 | 788 | 8 | 798 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3s29_F | 0 | 4 | 788 | 8 | 798 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3s29_E | 0 | 4 | 788 | 8 | 798 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3s29_D | 0 | 4 | 788 | 8 | 798 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO794519 | 797 | 4 | 788 | 0 |
BU103683 | 796 | 3 | 788 | 0 |
CX109054 | 598 | 103 | 690 | 0 |
FG227316 | 455 | 277 | 720 | 0 |
HO410243 | 617 | 186 | 790 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|