Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G097400.1 |
Family | GH17 |
Protein Properties | Length: 382 Molecular Weight: 42299.7 Isoelectric Point: 4.8785 |
Chromosome | Chromosome/Scaffold: 04 Start: 8393768 End: 8395644 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 342 | 0 |
LGINYGQIANDLPSPTLAAVLLQSLNVHRVKLFDADLNVLIAFSNSNIELIIGLGNEDIQKMTVPTEAENWIQQNVQPHIPQTKITCIAVGNEVFSSNDA QLMFNLLPAMKMIHKTLVNLGLDKQVMITTPHSFNILENSYPPSCGTFREDLAEYIKPLLSFLSQIKSPFFINAYPFFAYKADPTQISLDYVLFQPNKGM KDPTTNLLYDNMLYAQVDAVYSAMGHTDIEVKISETGWPSKGDPDEVGSTPENARLYHSNLIKRIQEKQGTPAKPSVPIEVYVSALFNEDLKTGPTSERN YGLFYPDCSPVYNI |
Full Sequence |
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Protein Sequence Length: 382 Download |
MATCLVLLRL LFSLLVIWGS AVQIHGVELG INYGQIANDL PSPTLAAVLL QSLNVHRVKL 60 FDADLNVLIA FSNSNIELII GLGNEDIQKM TVPTEAENWI QQNVQPHIPQ TKITCIAVGN 120 EVFSSNDAQL MFNLLPAMKM IHKTLVNLGL DKQVMITTPH SFNILENSYP PSCGTFREDL 180 AEYIKPLLSF LSQIKSPFFI NAYPFFAYKA DPTQISLDYV LFQPNKGMKD PTTNLLYDNM 240 LYAQVDAVYS AMGHTDIEVK ISETGWPSKG DPDEVGSTPE NARLYHSNLI KRIQEKQGTP 300 AKPSVPIEVY VSALFNEDLK TGPTSERNYG LFYPDCSPVY NIGLQDHFPT NGVVYSSAVS 360 NINALSVFSL LIFVMAYVIL V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 28 | 335 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-96 | 29 | 342 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 20 | 379 | 18 | 377 | unknown [Populus trichocarpa] |
RefSeq | XP_002305174.1 | 0 | 1 | 361 | 1 | 361 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312820.1 | 0 | 20 | 369 | 18 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328249.1 | 0 | 1 | 369 | 1 | 370 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 22 | 359 | 6 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 28 | 342 | 1 | 313 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3f55_C | 0 | 28 | 342 | 1 | 313 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3f55_B | 0 | 28 | 342 | 1 | 313 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3f55_A | 0 | 28 | 342 | 1 | 313 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3em5_D | 0 | 28 | 342 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |