y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.004G109200.1 |
Family | GH1 |
Protein Properties | Length: 435 Molecular Weight: 49778 Isoelectric Point: 6.1418 |
Chromosome | Chromosome/Scaffold: 04 Start: 9722708 End: 9725265 |
Description | beta glucosidase 12 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 16 | 400 | 0 |
GVNEEGIKFYNDLIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPNIVNDFRDFADLCFQNFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVN DPHRSLNTGATEVYTVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEADQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPEF TAEESKMLKGSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIYPEGISRLLNYTKDLYGSPTIYITENGVDDVNNNA SSLKEALNDPIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKQSVKWFKQFLRRD |
Full Sequence |
---|
Protein Sequence Length: 435 Download |
MVPLIFISVL EWLSAGVNEE GIKFYNDLID DLLKNGLQPY VTLFHWDTPQ ALEDKYGGFL 60 SPNIVNDFRD FADLCFQNFG DRVKKWITLN EPWMFSVQGY DMGTMAPGRI SVVVNDPHRS 120 LNTGATEVYT VSHHLLLAHA AAVKLYKEKY QSCQGGQIGI TLVSHWFEPY SNSEADQNAT 180 KRSLDFMLGW FMDPLTNGDY PRNMHDFVGG RLPEFTAEES KMLKGSYDFI GINYYTTYYA 240 QNIDANYQSV GFMSDARANW TGERNGIPIG PQAGVKWLYI YPEGISRLLN YTKDLYGSPT 300 IYITENGVDD VNNNASSLKE ALNDPIREKS YKDHLKNVLR SINEHGVDVK GFFAWSLMDN 360 FEWGSGYAVR FGLYYVDYKN DLKRYPKQSV KWFKQFLRRD SHSPIPHTYP LITSNETSKI 420 EDSLVRDAKR PRNA* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 2.0e-84 | 17 | 404 | 397 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-87 | 17 | 401 | 391 | + beta-glucosidase | ||
COG2723 | BglB | 7.0e-91 | 17 | 395 | 394 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-105 | 17 | 393 | 380 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 7.0e-129 | 14 | 399 | 392 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330982.1 | 0 | 13 | 434 | 98 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330983.1 | 0 | 13 | 397 | 91 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 13 | 434 | 98 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332805.1 | 0 | 13 | 397 | 91 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332916.1 | 0 | 13 | 401 | 1 | 389 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 13 | 399 | 120 | 505 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptq_A | 0 | 13 | 399 | 120 | 505 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_B | 0 | 13 | 399 | 120 | 505 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptm_A | 0 | 13 | 399 | 120 | 505 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ptk_B | 0 | 13 | 399 | 120 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |