Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G128900.3 |
Family | CE8 |
Protein Properties | Length: 245 Molecular Weight: 27304.2 Isoelectric Point: 7.7465 |
Chromosome | Chromosome/Scaffold: 04 Start: 13983757 End: 13986233 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 205 | 0 |
VTVAQDGSGDFTTVQEAVDAVPLCNTCRTVIRVPPGVYRQPVYVPKTKNLITLAGLRPEDTILTWNNTSAKIDHHQASRVIGTGTFGCGTVIVEGEDFIA ENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQESTGYVFLR |
Full Sequence |
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Protein Sequence Length: 245 Download |
MASRVVTVAQ DGSGDFTTVQ EAVDAVPLCN TCRTVIRVPP GVYRQPVYVP KTKNLITLAG 60 LRPEDTILTW NNTSAKIDHH QASRVIGTGT FGCGTVIVEG EDFIAENITF ENSSPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRKSSQESTG YVFLRYVFIG FHLYFQLFLP PIKFSVKVFA MLASFFWRSW 240 TALY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-58 | 4 | 203 | 208 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 8.0e-60 | 1 | 204 | 206 | + putative pectinesterase | ||
pfam01095 | Pectinesterase | 9.0e-67 | 6 | 203 | 203 | + Pectinesterase. | ||
PLN02682 | PLN02682 | 2.0e-68 | 3 | 204 | 210 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 6.0e-161 | 1 | 210 | 210 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 230 | 1 | 232 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 3 | 210 | 4 | 211 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 240 | 1 | 248 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 230 | 1 | 232 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 210 | 1 | 210 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.80909e-45 | 6 | 205 | 9 | 203 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-31 | 8 | 200 | 7 | 194 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-17 | 5 | 197 | 7 | 217 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-17 | 5 | 197 | 7 | 217 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-17 | 5 | 197 | 7 | 217 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |