Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G132700.1 |
Family | GH17 |
Protein Properties | Length: 402 Molecular Weight: 44089.6 Isoelectric Point: 4.8756 |
Chromosome | Chromosome/Scaffold: 04 Start: 15200474 End: 15202603 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 350 | 0 |
LGINYGQVGNNLPQPEKVLDLLSSLKLTKARIYDTNPQVLTAFANSNVELIVTVENQMLAVLMDPQQALQWVSNHIKPYFPATRITGIAVGNEVFTDSDT TLLASVVPAIVSIHGALAQLGLDTYIQVSTPNSLAVLAESYPPSAGSFKTEVSGIMSQYLQFLSSTKAPFWINAYPYFAYKDKPDEVPLDYVLFNPNAGM VDPYTKLHYDNMLYAQVDAVLFAIARMGFGGIEVGVSETGWPSKGDADEVGAIVDNAAAYSKNILRRQLKNEGTPLRPNMKLEVYLFALFNEDMKPGPTS ERNYGLFQPDCTMVYNV |
Full Sequence |
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Protein Sequence Length: 402 Download |
MALFCIRIAI IHIFLLLFLT SSDNYGFLRG VTSLGINYGQ VGNNLPQPEK VLDLLSSLKL 60 TKARIYDTNP QVLTAFANSN VELIVTVENQ MLAVLMDPQQ ALQWVSNHIK PYFPATRITG 120 IAVGNEVFTD SDTTLLASVV PAIVSIHGAL AQLGLDTYIQ VSTPNSLAVL AESYPPSAGS 180 FKTEVSGIMS QYLQFLSSTK APFWINAYPY FAYKDKPDEV PLDYVLFNPN AGMVDPYTKL 240 HYDNMLYAQV DAVLFAIARM GFGGIEVGVS ETGWPSKGDA DEVGAIVDNA AAYSKNILRR 300 QLKNEGTPLR PNMKLEVYLF ALFNEDMKPG PTSERNYGLF QPDCTMVYNV GISALSSPSS 360 TSSASISDLA SSATKDTSME SLVYLQFMIF LTFHVFMRRA Y* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 109 | 329 | 224 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-90 | 34 | 350 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 7 | 401 | 7 | 408 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 2 | 351 | 3 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 31 | 352 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 1 | 375 | 1 | 373 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 10 | 351 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 34 | 353 | 2 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_C | 0 | 34 | 353 | 2 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_B | 0 | 34 | 353 | 2 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_A | 0 | 34 | 353 | 2 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3em5_D | 0 | 34 | 353 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |