Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G151100.1 |
Family | AA6 |
Protein Properties | Length: 269 Molecular Weight: 29107.4 Isoelectric Point: 9.2986 |
Chromosome | Chromosome/Scaffold: 04 Start: 17337879 End: 17340768 |
Description | Quinone reductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 59 | 253 | 0 |
KIFIIFYSMYAHVELMARRIKKGVDSIEGVEGVLYRVPETLLQGTLEQMKVPQKGNDVPLIKVDELVNADGFLFGFPTRFGSMAAQMKAFFDSTHELWMK QKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMVFVPIGYTFGAGMFRMDSIRGGSPYGAGVLSGDGTREPSATELALAEHQGKYMATVVK |
Full Sequence |
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Protein Sequence Length: 269 Download |
MGKGGGCVPS KRRPPIEVPD QEPSLQETNS AISSQNQITS TNTTIPVQYN PTLAVKKCKI 60 FIIFYSMYAH VELMARRIKK GVDSIEGVEG VLYRVPETLL QGTLEQMKVP QKGNDVPLIK 120 VDELVNADGF LFGFPTRFGS MAAQMKAFFD STHELWMKQK LAGVPAGFFV STGTQGGGQE 180 TTAWTAITQL VHHGMVFVPI GYTFGAGMFR MDSIRGGSPY GAGVLSGDGT REPSATELAL 240 AEHQGKYMAT VVKRFARPFS LAPGEKHN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 2.0e-7 | 62 | 194 | 143 | + Flavodoxin. | ||
pfam03358 | FMN_red | 1.0e-8 | 121 | 202 | 82 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 1.0e-31 | 56 | 257 | 210 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 5.0e-53 | 59 | 254 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 1.0e-64 | 59 | 257 | 202 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23836.1 | 0 | 1 | 257 | 1 | 254 | unknown [Glycine max] |
RefSeq | XP_002273030.1 | 0 | 1 | 257 | 1 | 255 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280986.1 | 0 | 1 | 263 | 1 | 256 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306085.1 | 0 | 1 | 268 | 1 | 268 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519089.1 | 0 | 1 | 268 | 1 | 266 | Minor allergen Alt a, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 58 | 255 | 1 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 58 | 255 | 1 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 58 | 255 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 58 | 255 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 58 | 255 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT489852 | 216 | 54 | 269 | 0 |
CK106140 | 192 | 46 | 237 | 0 |
CU596600 | 215 | 55 | 269 | 0 |
DR944298 | 265 | 1 | 255 | 0 |
DY283319 | 258 | 1 | 258 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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