Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G156400.2 |
Family | AA1 |
Protein Properties | Length: 541 Molecular Weight: 60137.1 Isoelectric Point: 8.3306 |
Chromosome | Chromosome/Scaffold: 04 Start: 17817724 End: 17821332 |
Description | laccase 11 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 9 | 528 | 0 |
HHHECCIQVKNVSRLCHAKPIVTVNGRFPGPTVYVREGDRVQVNVTNHAKYNMSIHWHGLKQFRNGWADGPAYITQCPIKTGHSYTYDFNVTGQRGTLWW HAHIFWLRATVYGAIVIMPKPGTPFPFPQPHREETIILGEWWNNDVEEIEKQGSKLGLPPNASDAHTINGKPGTLFPCSEKHTFAMEVEQGKTYLLRIIN AALNDELFFAIAGHNMTVVEVDAVYTKHFTTQAVLIAPGQTTNVLVQATQSPNRYFMAARPFMDAPLTVDNKTATAILQYKGIPNTVIPILPKLPAPNDT AFALSYNAKLRSLNSPQFPANVPLKVDRHLFYTIGLGINPCPSCLNGTRLTASLNNITFVMPQIGLLQAHYFNTKGIFRLDFPDNPPSPFNYTGVPLTAN LGTTLGTRLSKIVYNSTVQLVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFKADNPGVWFMHCHLEL HTSWGLKTAFVVEDGVGPDQ |
Full Sequence |
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Protein Sequence Length: 541 Download |
MLIEMIIWHH HECCIQVKNV SRLCHAKPIV TVNGRFPGPT VYVREGDRVQ VNVTNHAKYN 60 MSIHWHGLKQ FRNGWADGPA YITQCPIKTG HSYTYDFNVT GQRGTLWWHA HIFWLRATVY 120 GAIVIMPKPG TPFPFPQPHR EETIILGEWW NNDVEEIEKQ GSKLGLPPNA SDAHTINGKP 180 GTLFPCSEKH TFAMEVEQGK TYLLRIINAA LNDELFFAIA GHNMTVVEVD AVYTKHFTTQ 240 AVLIAPGQTT NVLVQATQSP NRYFMAARPF MDAPLTVDNK TATAILQYKG IPNTVIPILP 300 KLPAPNDTAF ALSYNAKLRS LNSPQFPANV PLKVDRHLFY TIGLGINPCP SCLNGTRLTA 360 SLNNITFVMP QIGLLQAHYF NTKGIFRLDF PDNPPSPFNY TGVPLTANLG TTLGTRLSKI 420 VYNSTVQLVL QDTNLLTVES HPFHLHGYNF FVVGTGIGNF DPKKDPAKFN LVDPPERNTV 480 GVPTGGWTAI RFKADNPGVW FMHCHLELHT SWGLKTAFVV EDGVGPDQSI LPPPKDLPPC 540 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 6.0e-68 | 24 | 519 | 534 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-82 | 24 | 524 | 539 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-91 | 24 | 524 | 541 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 9 | 540 | 536 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI32739.1 | 0 | 15 | 540 | 37 | 562 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266464.1 | 0 | 15 | 540 | 38 | 563 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305436.1 | 0 | 1 | 540 | 1 | 540 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313847.1 | 0 | 15 | 540 | 36 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512915.1 | 0 | 15 | 540 | 33 | 558 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 519 | 19 | 522 | N Chain N, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex |
PDB | 1asq_A | 0 | 24 | 519 | 19 | 522 | N Chain N, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex |
PDB | 1asp_B | 0 | 24 | 519 | 19 | 522 | N Chain N, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797675 | 494 | 53 | 541 | 0 |
EE591979 | 569 | 7 | 536 | 0 |
EX130854 | 291 | 251 | 541 | 0 |
DT744390 | 267 | 11 | 277 | 0 |
FC458441 | 267 | 198 | 464 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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