| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.004G161900.1 |
| Family | GH9 |
| Protein Properties | Length: 249 Molecular Weight: 27581.7 Isoelectric Point: 4.4463 |
| Chromosome | Chromosome/Scaffold: 04 Start: 18275107 End: 18276987 |
| Description | glycosyl hydrolase 9B18 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 29 | 240 | 0 |
| EYQDALSKSILFFEGQRSGYLPQDQRVTWRANSGLSDGWTYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVNEFGDLMPPNELRNSLVAIRWATDYLL KTVSQPNRIFVQVGDPNGDHICWERPEDMDTPRVVYAVDAPNPASDVAGETAAALAASSMAFRSSDPGYAETLLRNAINAFQFADSYRGAYSDNSNIKDG ACPFYCDFDGYQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 249 Download |
| MKNLSPPHHA LLFTALLAQL PLFQSSYHEY QDALSKSILF FEGQRSGYLP QDQRVTWRAN 60 SGLSDGWTYN TDLTGGYYDA GDNVKFGFPM AFTTTMLAWS VNEFGDLMPP NELRNSLVAI 120 RWATDYLLKT VSQPNRIFVQ VGDPNGDHIC WERPEDMDTP RVVYAVDAPN PASDVAGETA 180 AALAASSMAF RSSDPGYAET LLRNAINAFQ FADSYRGAYS DNSNIKDGAC PFYCDFDGYQ 240 VSRNSLMI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 2.0e-81 | 30 | 240 | 212 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-90 | 30 | 240 | 212 | + Glycosyl hydrolase family 9. | ||
| PLN02308 | PLN02308 | 3.0e-94 | 28 | 240 | 213 | + endoglucanase | ||
| PLN02266 | PLN02266 | 8.0e-104 | 28 | 240 | 213 | + endoglucanase | ||
| PLN03009 | PLN03009 | 7.0e-141 | 25 | 240 | 216 | + cellulase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54548.1 | 0 | 6 | 240 | 5 | 240 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| EMBL | CBI37993.1 | 0 | 21 | 240 | 20 | 239 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_568050.1 | 0 | 21 | 240 | 21 | 241 | AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002305460.1 | 0 | 23 | 240 | 1 | 218 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512990.1 | 0 | 19 | 240 | 14 | 236 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 28 | 222 | 3 | 198 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
| PDB | 1ksc_A | 0 | 28 | 222 | 3 | 198 | A Chain A, The Crystal Structure Of Este1, A New Thermophilic And Thermostable Carboxylesterase Cloned From A Metagenomic Library |
| PDB | 1ks8_A | 0 | 28 | 222 | 3 | 198 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 30 | 240 | 6 | 213 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 30 | 240 | 6 | 213 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
