| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.004G167500.1 |
| Family | GH100 |
| Protein Properties | Length: 574 Molecular Weight: 65425.2 Isoelectric Point: 6.5744 |
| Chromosome | Chromosome/Scaffold: 04 Start: 18703965 End: 18707596 |
| Description | Plant neutral invertase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH100 | 105 | 560 | 0 |
| THPAVAEAWDALRRSLVVFRGQPVGTIAALDNTGEQLNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFHLGEGVMPASFKVLHDP VRNSETLMADFGESAIGRVAPVDSGFWWIFLLRAYTKSTGDTSLAEMPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFM ALRCALLLLKQDEEGKEFVERITKRLHALSFHMRSYYWIDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWIFDFMPVHGGYFIGNVSPAKMDFRWFC LGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVIYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIELAETR LVKDNWPEYYDGKLGRFVGKQARKFQTWSIAGYLVAKMLLEDPSHLGMVALEEDKQ | |||
| Full Sequence |
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| Protein Sequence Length: 574 Download |
| MSSLDGDVSQ NGSLKSVDAH PALAEIEDLD FSRILDKPPR PLNMERQRSC DERSLNELFG 60 VPLLSPRPSS RAESNFRLID HLDGLYSPGR RSGFNTPRSQ YGFETHPAVA EAWDALRRSL 120 VVFRGQPVGT IAALDNTGEQ LNYDQVFVRD FVPSALAFLM NGEPEIVKNF ILKTLRLQSW 180 EKKIDRFHLG EGVMPASFKV LHDPVRNSET LMADFGESAI GRVAPVDSGF WWIFLLRAYT 240 KSTGDTSLAE MPECQKGMRL ILSLCLSEGF DTFPTLLCAD GCCMIDRRMG VYGYPIEIQA 300 LFFMALRCAL LLLKQDEEGK EFVERITKRL HALSFHMRSY YWIDLKQLND IYRYKTEEYS 360 HTAVNKFNVI PDSLPEWIFD FMPVHGGYFI GNVSPAKMDF RWFCLGNCIA ILSSLATPEQ 420 STAIMDLIES RWEELVGEMP LKVIYPAIES HEWRIVTGCD PKNTRWSYHN GGSWPVLLWL 480 LTAACIKTGR PQIARRAIEL AETRLVKDNW PEYYDGKLGR FVGKQARKFQ TWSIAGYLVA 540 KMLLEDPSHL GMVALEEDKQ MKPPMRRSHS WTF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 7.0e-5 | 467 | 565 | 103 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| PLN02973 | PLN02973 | 0 | 3 | 572 | 572 | + beta-fructofuranosidase | ||
| PLN03005 | PLN03005 | 0 | 14 | 572 | 562 | + beta-fructofuranosidase | ||
| pfam12899 | Glyco_hydro_100 | 0 | 111 | 547 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
| PLN02703 | PLN02703 | 0 | 111 | 562 | 458 | + beta-fructofuranosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAP59641.1 | 0 | 1 | 573 | 1 | 573 | putative neutral invertase [Vitis vinifera] |
| EMBL | CAP59642.1 | 0 | 1 | 573 | 1 | 573 | putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002276670.1 | 0 | 1 | 573 | 1 | 572 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002306166.1 | 0 | 1 | 573 | 1 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312983.1 | 0 | 1 | 573 | 1 | 574 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES848839 | 359 | 207 | 563 | 0 |
| ES809234 | 323 | 235 | 557 | 0 |
| CK269009 | 331 | 244 | 574 | 0 |
| JG588921 | 317 | 240 | 556 | 0 |
| DY262604 | 313 | 94 | 406 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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