y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G180500.1 |
Family | AA1 |
Protein Properties | Length: 545 Molecular Weight: 61084.6 Isoelectric Point: 9.3811 |
Chromosome | Chromosome/Scaffold: 04 Start: 19742016 End: 19745690 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 37 | 498 | 0 |
TYGDIYPLGVKQQGILINGQFPGPDIYSVTNNNLIINVYNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYYPSLAFHK AAGGFGGIRILSRPLIPVPFPEPADDFTVLIGDWYKANHTALKAILDRGHKLPLPDGILVNGRGPNQTYFTFQPGKTYRLRISNVGLQHSLNFRIQGHKM KLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQTAQDYYIAVSTRFTTKILTTTAILHYSNSAKKVSGPIPGGPTTEIDWSLNQARSIRTNLTASGPRP NPQGSYHYGMINLTRTIKLESSAAQVNGKQRYAVNSVSFVPADTPLKIADYFKIGGVFRVGSMPDYPTGKKMYLDTSVMGADFRAFVEIVFQNHENIVQS WHINGYSFWVVGMDGGVWTPASRNQYNLRDAVSRCTTQVYPKSWTAIYIALDNVGMWNIRTE |
Full Sequence |
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Protein Sequence Length: 545 Download |
MGCGATCWQV LVCVTFCCTL VFVNAEDPYR FFTWNVTYGD IYPLGVKQQG ILINGQFPGP 60 DIYSVTNNNL IINVYNSLPE PFLISWNGVQ QRRNSYEDGV YGTTCPIPPG KNFTYILQVK 120 DQIGSFYYYP SLAFHKAAGG FGGIRILSRP LIPVPFPEPA DDFTVLIGDW YKANHTALKA 180 ILDRGHKLPL PDGILVNGRG PNQTYFTFQP GKTYRLRISN VGLQHSLNFR IQGHKMKLVE 240 VEGTHTLQTT YSSLDVHVGQ SYSVLVTADQ TAQDYYIAVS TRFTTKILTT TAILHYSNSA 300 KKVSGPIPGG PTTEIDWSLN QARSIRTNLT ASGPRPNPQG SYHYGMINLT RTIKLESSAA 360 QVNGKQRYAV NSVSFVPADT PLKIADYFKI GGVFRVGSMP DYPTGKKMYL DTSVMGADFR 420 AFVEIVFQNH ENIVQSWHIN GYSFWVVGMD GGVWTPASRN QYNLRDAVSR CTTQVYPKSW 480 TAIYIALDNV GMWNIRTEFW ARQYLGQQFY MRVYSPVESP RDEYPIPKNA LLCGRAIGRR 540 TRPL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 25 | 544 | 521 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 25 | 541 | 520 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 24 | 538 | 523 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 24 | 541 | 520 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 28 | 535 | 519 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83942.1 | 0 | 16 | 544 | 13 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282214.1 | 0 | 10 | 544 | 9 | 542 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285913.1 | 0 | 16 | 544 | 13 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306213.1 | 0 | 1 | 544 | 1 | 543 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528421.1 | 0 | 20 | 544 | 20 | 544 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 30 | 534 | 4 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 0 | 30 | 534 | 4 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 0 | 30 | 534 | 4 | 539 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |