| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.004G227200.1 |
| Family | GH116 |
| Protein Properties | Length: 950 Molecular Weight: 105992 Isoelectric Point: 6.0232 |
| Chromosome | Chromosome/Scaffold: 04 Start: 23253198 End: 23263171 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 525 | 886 | 0 |
| GQFLYLEGIEYPMWNTYDVHFYASFALIMLFPKLQLSIQRDFAAAVMMHDPSKMHLLLDGQCVTRKVLGAVPHDIGIDDPWFEVNAYNLHNTDRWKDLNP KFVLQVYRDVVATGDKKFAQAAWPSVYVAMAYMDQFDKDGDGMIENDGFPDQTYDTWSVSGVSAYCGGLWVAALQAASALAWEVGDKDSAEYFWFRFQKA KVVYDKLWNGSYFNYDDSNGRNSPSIQADQLAGQWYARACGLLPIVDEDKARSALEKIYNYNFLKVHDGKRGAVNGMLPDGTVDMSDMQSREIWSGVTYA VAATMMQEGLMDMAFHTASGVYEAAWAEQGLGYSFQTPEGWNTNGQYRSLGYMRPLAIWAMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 950 Download |
| MTERKISRNG SDEEQGEPSN SPADKIKVDP GKPAPLTWQR RLDTSETVLS QFTLTWQEIL 60 RMAPIGIRLW RYVKENAKKK KGIFIDPFAK RNVTSSHGIP VGGVGSGSIG RSYRGEFQRW 120 QLFPRVEEKP VLANQFSIFV SRSNGKKYCS VLCSRSPDKL EEPAGSGIES WEWNLKGDNS 180 RYHALYPRAW TVYEGEPDPE LRVVCRQISP VIPHNYKESS FPVSVFTFTL YNSGETAADV 240 TLLFTWANSV GGVSEFSGQH LNSTKMMDDG VHCVLLHHKT ANELPPLTFA IAAQETPGVH 300 VSKCPSFVIS GNSQGLTAKE MWNEVKEHGS FDNLNSSGKP VPSEPGSSIG AAIAATSTVP 360 PDSVCTVTFS LAWDCPEVIF ASGRTYHRRY TKFYGTHGDA AANIAHDAIL GHGHWDSQIE 420 AWQRPILEDK RLPEWYPVTL FNELYYLNSG GTIWTDGSPP LHSLATVGGK KFSLDRTGSD 480 LGHQGDTSVD ILGRMTSVLE QIHTPLATNS ALGTNLLQEG EENVGQFLYL EGIEYPMWNT 540 YDVHFYASFA LIMLFPKLQL SIQRDFAAAV MMHDPSKMHL LLDGQCVTRK VLGAVPHDIG 600 IDDPWFEVNA YNLHNTDRWK DLNPKFVLQV YRDVVATGDK KFAQAAWPSV YVAMAYMDQF 660 DKDGDGMIEN DGFPDQTYDT WSVSGVSAYC GGLWVAALQA ASALAWEVGD KDSAEYFWFR 720 FQKAKVVYDK LWNGSYFNYD DSNGRNSPSI QADQLAGQWY ARACGLLPIV DEDKARSALE 780 KIYNYNFLKV HDGKRGAVNG MLPDGTVDMS DMQSREIWSG VTYAVAATMM QEGLMDMAFH 840 TASGVYEAAW AEQGLGYSFQ TPEGWNTNGQ YRSLGYMRPL AIWAMQWTLS SPKLHKQEMN 900 FQVKLEDSLL GHQHHAGFAK VARFLKLPEE ESSVSYLQAL FDYACKKFG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 3.0e-25 | 161 | 456 | 308 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-51 | 116 | 408 | 302 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-68 | 524 | 885 | 380 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-168 | 525 | 887 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 1 | 948 | 1 | 955 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 6 | 948 | 1 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 27 | 948 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 1 | 949 | 1 | 946 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 1 | 949 | 1 | 950 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 543 | 870 | 0 |
| DY292040 | 353 | 538 | 887 | 0 |
| CK110603 | 285 | 600 | 884 | 0 |
| DY669443 | 287 | 359 | 639 | 0 |
| GT176060 | 351 | 438 | 782 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
