| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.004G227200.2 |
| Family | GH116 |
| Protein Properties | Length: 948 Molecular Weight: 105751 Isoelectric Point: 5.9532 |
| Chromosome | Chromosome/Scaffold: 04 Start: 23253198 End: 23263167 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 523 | 884 | 0 |
| GQFLYLEGIEYPMWNTYDVHFYASFALIMLFPKLQLSIQRDFAAAVMMHDPSKMHLLLDGQCVTRKVLGAVPHDIGIDDPWFEVNAYNLHNTDRWKDLNP KFVLQVYRDVVATGDKKFAQAAWPSVYVAMAYMDQFDKDGDGMIENDGFPDQTYDTWSVSGVSAYCGGLWVAALQAASALAWEVGDKDSAEYFWFRFQKA KVVYDKLWNGSYFNYDDSNGRNSPSIQADQLAGQWYARACGLLPIVDEDKARSALEKIYNYNFLKVHDGKRGAVNGMLPDGTVDMSDMQSREIWSGVTYA VAATMMQEGLMDMAFHTASGVYEAAWAEQGLGYSFQTPEGWNTNGQYRSLGYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 948 Download |
| MTERKISRNG SDEEQGEPSN SPADKVDPGK PAPLTWQRRL DTSETVLSQF TLTWQEILRM 60 APIGIRLWRY VKENAKKKKG IFIDPFAKRN VTSSHGIPVG GVGSGSIGRS YRGEFQRWQL 120 FPRVEEKPVL ANQFSIFVSR SNGKKYCSVL CSRSPDKLEE PAGSGIESWE WNLKGDNSRY 180 HALYPRAWTV YEGEPDPELR VVCRQISPVI PHNYKESSFP VSVFTFTLYN SGETAADVTL 240 LFTWANSVGG VSEFSGQHLN STKMMDDGVH CVLLHHKTAN ELPPLTFAIA AQETPGVHVS 300 KCPSFVISGN SQGLTAKEMW NEVKEHGSFD NLNSSGKPVP SEPGSSIGAA IAATSTVPPD 360 SVCTVTFSLA WDCPEVIFAS GRTYHRRYTK FYGTHGDAAA NIAHDAILGH GHWDSQIEAW 420 QRPILEDKRL PEWYPVTLFN ELYYLNSGGT IWTDGSPPLH SLATVGGKKF SLDRTGSDLG 480 HQGDTSVDIL GRMTSVLEQI HTPLATNSAL GTNLLQEGEE NVGQFLYLEG IEYPMWNTYD 540 VHFYASFALI MLFPKLQLSI QRDFAAAVMM HDPSKMHLLL DGQCVTRKVL GAVPHDIGID 600 DPWFEVNAYN LHNTDRWKDL NPKFVLQVYR DVVATGDKKF AQAAWPSVYV AMAYMDQFDK 660 DGDGMIENDG FPDQTYDTWS VSGVSAYCGG LWVAALQAAS ALAWEVGDKD SAEYFWFRFQ 720 KAKVVYDKLW NGSYFNYDDS NGRNSPSIQA DQLAGQWYAR ACGLLPIVDE DKARSALEKI 780 YNYNFLKVHD GKRGAVNGML PDGTVDMSDM QSREIWSGVT YAVAATMMQE GLMDMAFHTA 840 SGVYEAAWAE QGLGYSFQTP EGWNTNGQYR SLGYMRPLAI WAMQWTLSSP KLHKQEMNFQ 900 VKLEDSLLGH QHHAGFAKVA RFLKLPEEES SVSYLQALFD YACKKFG* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 3.0e-25 | 159 | 454 | 308 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-51 | 114 | 406 | 302 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-68 | 522 | 883 | 380 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-168 | 523 | 885 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 1 | 946 | 1 | 955 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 6 | 946 | 1 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 25 | 946 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 1 | 947 | 1 | 946 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 1 | 947 | 1 | 950 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 541 | 868 | 0 |
| DY292040 | 353 | 536 | 885 | 0 |
| CK110603 | 285 | 598 | 882 | 0 |
| DY669443 | 287 | 357 | 637 | 0 |
| GT176060 | 351 | 436 | 780 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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