CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.004G234900.1
FamilyAA3
Protein PropertiesLength: 766 Molecular Weight: 83687.4 Isoelectric Point: 6.8852
ChromosomeChromosome/Scaffold: 04 Start: 24076825 End: 24080299
DescriptionLong-chain fatty alcohol dehydrogenase family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA32267580
  PVSIRRGKDIDSSRDFSTSNPSLVIKCDAVVVGSGSGGGVVAGVLAKAGYKVLVLEKGNYFARNNLSLLEGPSMDQMYLGAGMLASDDMGVVVLAGSTVG
  GGSTINWSASIKTPQHVINEWSETYDLELFDSKLYKEALDAVCEKMGVQSDIDEEGFNSAVLRRGCEELGYPVNTIPRNSVPDHYCGWCCFGCKDGRKKG
  TCETWLKDMVNSGNGAILPGCEAIKVLHERKKGKDRSTASGVAFGFEYNGMKDLCVVESKVTIVAGGALSTPALLKASGLKNANIGKHLHLHPVTMAWGY
  FPEAPISTTAWPEEQKKSYEGGIMTAMSTVVANVNKSGYGAVIQTPSLHPGMFSGLIPWISGADMKRRMCRFSRTAHVFALARDRGSGTVNSPSSINYRM
  DAEDEKNLQEGLEKTLRILAAAGAEEIGTHHSTGKSLNVKKVSYREFERFVKEESARPLRDLTGQICSAHQMGSCRMGVNPKESAVNQMGEAWEVEGLFV
  ADTSVFPTALGVNPMVTVQAIAYCTAQSVVQLL
Full Sequence
Protein Sequence     Length: 766     Download
MESLTAICDT LFPSVYNSSM MAASADDGST NSISTFYQSS ASMAGTPQRV GELFCDRVQH    60
PKKWLIRLTL YLLSTWIGTF ILCGLPSISP SFPYFLRFSQ ISQSKREQIV FSWATSFFYL    120
LRMLFKSIKL VIPLVFFSQV DEKNENLTWK AIGYPGPDPA ALKRQTQTCG LPETLYASLK    180
DDDDDDDDDQ HDCKEEHLFG PLYRGLVDLN LPRDRVADSL RQIGFPVSIR RGKDIDSSRD    240
FSTSNPSLVI KCDAVVVGSG SGGGVVAGVL AKAGYKVLVL EKGNYFARNN LSLLEGPSMD    300
QMYLGAGMLA SDDMGVVVLA GSTVGGGSTI NWSASIKTPQ HVINEWSETY DLELFDSKLY    360
KEALDAVCEK MGVQSDIDEE GFNSAVLRRG CEELGYPVNT IPRNSVPDHY CGWCCFGCKD    420
GRKKGTCETW LKDMVNSGNG AILPGCEAIK VLHERKKGKD RSTASGVAFG FEYNGMKDLC    480
VVESKVTIVA GGALSTPALL KASGLKNANI GKHLHLHPVT MAWGYFPEAP ISTTAWPEEQ    540
KKSYEGGIMT AMSTVVANVN KSGYGAVIQT PSLHPGMFSG LIPWISGADM KRRMCRFSRT    600
AHVFALARDR GSGTVNSPSS INYRMDAEDE KNLQEGLEKT LRILAAAGAE EIGTHHSTGK    660
SLNVKKVSYR EFERFVKEES ARPLRDLTGQ ICSAHQMGSC RMGVNPKESA VNQMGEAWEV    720
EGLFVADTSV FPTALGVNPM VTVQAIAYCT AQSVVQLLSR KRTHY* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR02462pyranose_ox0.000369575864+
TIGR01810betA0.0002421732337+
pfam05199GMC_oxred_C2.0e-22608748148+
COG2303BetA3.0e-42270748544+
pfam00732GMC_oxred_N2.0e-68299519224+
Gene Ontology
GO TermDescription
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI29206.10175940645unnamed protein product [Vitis vinifera]
RefSeqNP_193673.2017621726alcohol oxidase-related [Arabidopsis thaliana]
RefSeqXP_002269629.10176240787PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002328753.1017651748predicted protein [Populus trichocarpa]
RefSeqXP_002519938.10497637710electron carrier, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1kdg_B0.00052535229288A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase
PDB1kdg_A0.00052535229288A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase
PDB1naa_B0.00062535224283A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam
PDB1naa_A0.00062535224283A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam
PDB3ljp_B0.001420746204518A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
Transmembrane Domains
StartEnd
6688
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC8838504662997640
HO79475376817580
DY2609542525137640
EY8046732572705260
EH6906502733466170
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_089_00009.1Aquca_049_00132.1Aquca_034_00307.1Aquca_034_00304.1
Arabidopsis lyrata914728491906479855470376
Arabidopsis thalianaAT4G19380.1AT4G28570.1AT3G23410.1AT1G03990.1
Brachypodium distachyonBradi3g28677.1Bradi3g28657.1Bradi3g49085.1
Brassica rapaBra012548Bra024190Bra013391Bra015283Bra001912
Bra014947
Carica papayaevm.model.supercontig_165.33evm.model.supercontig_44.31evm.model.supercontig_2124.1
Capsella rubellaCarubv10004418mCarubv10004208mCarubv10012453mCarubv10004212mCarubv10013046m
Citrus clementinaCiclev10011111mCiclev10004403mCiclev10004405mCiclev10018992m
Citrus sinensisorange1.1g003990morange1.1g004496m
Cucumis sativusCucsa.037200.2Cucsa.037200.1Cucsa.035240.1Cucsa.255570.1
Eucalyptus grandisEucgr.H03017.2Eucgr.H03017.1Eucgr.H00753.1Eucgr.K02114.1Eucgr.D02566.1
Eucgr.D02568.1
Fragaria vescamrna08288.1-v1.0-hybridmrna11513.1-v1.0-hybridmrna08285.1-v1.0-hybrid
Glycine maxGlyma09g35210.2Glyma01g35620.1Glyma16g16415.1Glyma16g08300.2Glyma10g32640.2
Glyma12g15940.1Glyma19g34960.1Glyma06g42400.2Glyma03g32220.2
Gossypium raimondiiGorai.001G179800.3Gorai.001G179800.2Gorai.001G179800.1Gorai.011G177100.3Gorai.011G177100.2
Gorai.011G177100.1Gorai.006G252500.1
Linum usitatissimumLus10003621Lus10024922Lus10035673Lus10008239Lus10022903
Lus10037257Lus10011800
Malus domesticaMDP0000233110MDP0000173300MDP0000208936MDP0000197715
Manihot esculentacassava4.1_004067mcassava4.1_002349mcassava4.1_002619mcassava4.1_002379mcassava4.1_025870m
Medicago truncatulaMedtr5g025650.1Medtr8g072210.1Medtr4g081080.1Medtr1g075650.1Medtr4g080890.1
Mimulus guttatusmgv1a001761mmgv1a022390mmgv1a001868mmgv1a001883mmgv1a001896m
Oryza sativaLOC_Os10g33540.1LOC_Os10g33520.1LOC_Os10g33460.1LOC_Os02g40840.1
Panicum virgatumPavirv00054947m
Physcomitrella patensPp1s58_61V6.1Pp1s7_216V6.1Pp1s48_250V6.1Pp1s2_413V6.1
Phaseolus vulgarisPhvul.002G122600.1Phvul.003G278200.1Phvul.007G124200.1Phvul.001G162800.1Phvul.011G136600.1
Picea abiesMA_10427118g0010MA_9032943g0010MA_9483g0010MA_10427421g0010MA_242814g0010
Populus trichocarpaPotri.004G234900.2Potri.010G069100.1Potri.008G169300.1Potri.002G259700.1
Prunus persicappa014756mppa018458mppa021498m
Ricinus communis29827.m00265529981.m00058628492.m000467
Setaria italicaSi034362mSi034354mSi034359mSi016380m
Selaginella moellendorffii1140891168557460173531
Sorghum bicolorSb01g019470.1Sb01g019460.1Sb01g019480.1Sb04g026370.1Sb04g026390.1
Thellungiella halophilaThhalv10024717mThhalv10024496mThhalv10024528mThhalv10020141mThhalv10006882m
Vitis viniferaGSVIVT01036891001GSVIVT01027855001GSVIVT01028371001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)