| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G010800.2 |
| Family | GH100 |
| Protein Properties | Length: 658 Molecular Weight: 74942.7 Isoelectric Point: 6.1698 |
| Chromosome | Chromosome/Scaffold: 05 Start: 798250 End: 802735 |
| Description | Plant neutral invertase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH100 | 170 | 628 | 0 |
| ESEIEKEAWKLLNDAVVMYCGSPVGTVAANDPGDKMPLNYDQVFIRDFVPSALAFLLRGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTV PLDDSKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIKLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQA LFYSALRCSREMIVVNDGSKNLVRAINNRLSALSFHIREYYWVDMNKINVIYRYKTEEYSTEATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDF RFFTLGNLWSVISSLGTPKHNEAILNLIEAKWDDLVGNMPLKICYPALEHEDWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMNRVELAQKAIAL AEKRLQVDHWPEYYDTRTGKFIGKQSRLYQTWTVAGFLTSKILLENPQRASLLFWDEDY | |||
| Full Sequence |
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| Protein Sequence Length: 658 Download |
| MRPSCRFFLS KKNRVFFNLH HSLTSNLSGN QFNFEKNKQF FTYPFRILGS RTIFKEAQKS 60 FCAPYISFGQ SRLITGDFRG ASIVASVASQ VRKFSTSVET RVNDNNFERI YVQNGIGIKP 120 LVVERIDKDE NVLGDEESRI GVLVDDCESV NRENLDGGQE VEIVSPKREE SEIEKEAWKL 180 LNDAVVMYCG SPVGTVAAND PGDKMPLNYD QVFIRDFVPS ALAFLLRGEG EIVKNFLLHT 240 LQLQSWEKTV DCYSPGQGLM PASFKVRTVP LDDSKFEEVL DPDFGESAIG RVAPVDSGLW 300 WIILLRAYGK LTGDYALQER VDVQTGIKLI LNLCLTDGFD MFPSLLVTDG SCMIDRRMGI 360 HGHPLEIQAL FYSALRCSRE MIVVNDGSKN LVRAINNRLS ALSFHIREYY WVDMNKINVI 420 YRYKTEEYST EATNKFNIYP EQIPSWLMDW IPEEGGYLIG NLQPAHMDFR FFTLGNLWSV 480 ISSLGTPKHN EAILNLIEAK WDDLVGNMPL KICYPALEHE DWRIITGSDP KNTPWSYHNG 540 GSWPTLLWQF TLACIKMNRV ELAQKAIALA EKRLQVDHWP EYYDTRTGKF IGKQSRLYQT 600 WTVAGFLTSK ILLENPQRAS LLFWDEDYEL LEICVCGLNT SGRKRCSRGA AKSQILV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06202 | GDE_C | 3.0e-6 | 295 | 607 | 340 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
| pfam12899 | Glyco_hydro_100 | 0 | 176 | 616 | 441 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
| PLN02703 | PLN02703 | 0 | 173 | 654 | 484 | + beta-fructofuranosidase | ||
| PLN03005 | PLN03005 | 0 | 176 | 630 | 455 | + beta-fructofuranosidase | ||
| PLN02973 | PLN02973 | 0 | 166 | 630 | 465 | + beta-fructofuranosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004135 | amylo-alpha-1,6-glucosidase activity |
| GO:0005978 | glycogen biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAP59645.1 | 0 | 1 | 657 | 12 | 674 | putative neutral invertase [Vitis vinifera] |
| EMBL | CAP59646.1 | 0 | 1 | 657 | 12 | 674 | putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002277312.1 | 0 | 1 | 657 | 1 | 662 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
| RefSeq | XP_002330026.1 | 0 | 159 | 656 | 1 | 507 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512536.1 | 0 | 1 | 657 | 12 | 685 | beta-fructofuranosidase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO811217 | 494 | 167 | 656 | 0 |
| DV161952 | 317 | 247 | 563 | 0 |
| HO466454 | 480 | 165 | 644 | 0 |
| HO779905 | 395 | 252 | 644 | 0 |
| EL455256 | 311 | 171 | 479 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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