Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G022700.1 |
Family | CE8 |
Protein Properties | Length: 539 Molecular Weight: 60055.1 Isoelectric Point: 8.0569 |
Chromosome | Chromosome/Scaffold: 05 Start: 1731890 End: 1733868 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 235 | 521 | 0 |
AIVAGDGTGHYRTITEAINEAPSYSNRRYIIYVKKGVYRENIDMKRKKSNIMFVGDGIGQTVVTGNRNFMQGWTSFRTATVAVSGKGFIARDMTFRNTAG PLNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHSLRQFYRECEIYGTIDYIFGNGAAVFQNCKIYTRVPLPLQKVTITAQGRKNPHQSTGFSIQDSYIFA SQPTYLGRPWKQYSRTVFMNTYMSALVQPRGWLEWYGNFALGTLWYGEYRNHGPGALLSGRVKWPGYHIIQDVATAKFFTAAQFIDG |
Full Sequence |
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Protein Sequence Length: 539 Download |
MALANFLFIL FFLPSLEALS NVTSSEEQTL NAQALIMQAC SDVENQSSCL SNFQAELKKS 60 GPTAHSILHA ALRATLDEAM RAIDMITKFN ALSVSYREQV AIEDCKELLD FSVSELAWSL 120 KEMNNIRAGI KNVHYEGNLK AWLSAALSNP DTCLEGFEGT DGHLENFIRG SLKQVTQLIG 180 NVLALYTQLH SLPFKPPRND NGTTTNSGSD KFPEWMTEGD QELLKGSSLG MHIDAIVAGD 240 GTGHYRTITE AINEAPSYSN RRYIIYVKKG VYRENIDMKR KKSNIMFVGD GIGQTVVTGN 300 RNFMQGWTSF RTATVAVSGK GFIARDMTFR NTAGPLNHQA VALRVDSDQS AFYRCSMEGY 360 QDTLYAHSLR QFYRECEIYG TIDYIFGNGA AVFQNCKIYT RVPLPLQKVT ITAQGRKNPH 420 QSTGFSIQDS YIFASQPTYL GRPWKQYSRT VFMNTYMSAL VQPRGWLEWY GNFALGTLWY 480 GEYRNHGPGA LLSGRVKWPG YHIIQDVATA KFFTAAQFID GLSWLPSTGV KFTAGLSN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-165 | 67 | 536 | 479 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 0 | 15 | 538 | 525 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 35 | 536 | 516 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 234 | 521 | 297 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 0 | 36 | 537 | 518 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187213.1 | 0 | 19 | 538 | 13 | 543 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002279144.1 | 0 | 4 | 538 | 7 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318977.1 | 0 | 1 | 538 | 1 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330224.1 | 0 | 37 | 538 | 1 | 502 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512462.1 | 0 | 29 | 538 | 28 | 535 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 234 | 536 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 227 | 536 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 5e-25 | 245 | 493 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-25 | 245 | 493 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-25 | 245 | 493 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |