Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G022800.1 |
Family | CE8 |
Protein Properties | Length: 538 Molecular Weight: 58978.5 Isoelectric Point: 7.0169 |
Chromosome | Chromosome/Scaffold: 05 Start: 1735917 End: 1737697 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 224 | 520 | 0 |
VVVDPYGSGKFRTITEAVAAAPNNTFASNGYYVIYVVAGVSNEYVSIPKSKKYLMMIGAGINQTVITGNRSVDDGWTTFNSATFAVLGQGFVAVNITFRN TAEAIKHQAVAVRSGADMSTFYKCSFEGYQDTLYTHSLRQFYRDCDIYGTIDYIFGNAAVVLQNCNIYSRLPLDNQFNTLTAQGRTDPNQNTGTSIQNCT IKAAKDLASSNSSTKTYLGRPWKEYSVTVIMQSFIDSVIDPAGWSAWSGEFALSTLYYAEFNNTGPGSNTTNRVQWPGYHVISGTEAANFTVSNFIA |
Full Sequence |
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Protein Sequence Length: 538 Download |
MASKLITLCT TSLLLLLLCS PSLANYSFSS IFNTPETICE NTRFPHFCKS SLPHNKPGTI 60 HDYAKISFQQ SLSHAQRLPS TLYKSTILAL EDCLFLAQEN IDYLSYVMET LKSSADDALQ 120 GYQAEDLQTL LSATLTNQET CLDGLQYRSS SSSIKNALLV PISNGTMHYS VALALFTRGW 180 AHSTMKGRYL TERKHVFSDL EDGASKGLPL MMSSKDKQIY DKVVVVDPYG SGKFRTITEA 240 VAAAPNNTFA SNGYYVIYVV AGVSNEYVSI PKSKKYLMMI GAGINQTVIT GNRSVDDGWT 300 TFNSATFAVL GQGFVAVNIT FRNTAEAIKH QAVAVRSGAD MSTFYKCSFE GYQDTLYTHS 360 LRQFYRDCDI YGTIDYIFGN AAVVLQNCNI YSRLPLDNQF NTLTAQGRTD PNQNTGTSIQ 420 NCTIKAAKDL ASSNSSTKTY LGRPWKEYSV TVIMQSFIDS VIDPAGWSAW SGEFALSTLY 480 YAEFNNTGPG SNTTNRVQWP GYHVISGTEA ANFTVSNFIA GGFWLPGTGV PYVGGLQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 5.0e-151 | 30 | 536 | 527 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-157 | 89 | 536 | 456 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 24 | 537 | 543 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 34 | 536 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 224 | 521 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002302726.1 | 0 | 1 | 536 | 1 | 557 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330223.1 | 0 | 1 | 537 | 1 | 567 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512460.1 | 0 | 34 | 537 | 32 | 548 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002512461.1 | 0 | 20 | 536 | 21 | 565 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002523112.1 | 0 | 34 | 536 | 39 | 565 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 224 | 536 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 225 | 536 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-21 | 220 | 526 | 4 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-21 | 220 | 526 | 4 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-21 | 220 | 526 | 4 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |