y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G022900.1 |
Family | CE8 |
Protein Properties | Length: 579 Molecular Weight: 64358.7 Isoelectric Point: 9.4921 |
Chromosome | Chromosome/Scaffold: 05 Start: 1739643 End: 1741480 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 265 | 559 | 0 |
DIVVAKDGSGDFSTIRDALHHVPIKSSKTFVLYIKAGIYQEYIDFNKSMTNLMVIGDGRETTRIVGNKNFVDGINTYHTATVVVLGDNFVAKNIGFENNA GAIKHQAVALRVSADYALFYNCSMDGHQDTMYTHAKRQFYRDCSISGTIDFVFGDASAVFQNCKFLIRKPLENQQCIVTAQGRKMRRQPSAIIIQNSTIT AHPDLFPERKLFKSYLGRPWKEFSRTIIMESFIDDVIQPEGWLPWLGTFGLKTCWYTEFNNNGPGSSKAARVKWNGIKTIDRQHALDFTPGRFFK |
Full Sequence |
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Protein Sequence Length: 579 Download |
MSYGDDSNRK RRIAVIGISS FLLVAMVVAV SVGVGLGNDG NEDLNDSNHK STNQVSASMK 60 AVKAICQPTD YRKTCEENLQ KAAGNTTDPR ELIKMAFKIA EKHVNEASKK SKVLEELSKD 120 PRTRGALQSC RELMTMSVDE LKQSLNKVTD FDITEIEKLM ADVKTWLSAS ITYQETCLDG 180 FQNTTTNAGK EMKKGLKLSM ELSANLLAIV SGISSAIPSL ESLGQRRLLQ DDLPVLGHGD 240 QIFPTWTDFG KRRLLAAPAS KIKADIVVAK DGSGDFSTIR DALHHVPIKS SKTFVLYIKA 300 GIYQEYIDFN KSMTNLMVIG DGRETTRIVG NKNFVDGINT YHTATVVVLG DNFVAKNIGF 360 ENNAGAIKHQ AVALRVSADY ALFYNCSMDG HQDTMYTHAK RQFYRDCSIS GTIDFVFGDA 420 SAVFQNCKFL IRKPLENQQC IVTAQGRKMR RQPSAIIIQN STITAHPDLF PERKLFKSYL 480 GRPWKEFSRT IIMESFIDDV IQPEGWLPWL GTFGLKTCWY TEFNNNGPGS SKAARVKWNG 540 IKTIDRQHAL DFTPGRFFKG GAWIKTTGIP YTPFLARK* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-160 | 10 | 575 | 569 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-179 | 265 | 560 | 297 | + Pectinesterase. | ||
PLN02217 | PLN02217 | 0 | 1 | 575 | 579 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 45 | 572 | 531 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 38 | 570 | 541 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39537.1 | 0 | 54 | 575 | 51 | 574 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279123.1 | 0 | 54 | 571 | 51 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318979.1 | 0 | 1 | 578 | 1 | 577 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330222.1 | 0 | 1 | 578 | 1 | 578 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512459.1 | 0 | 1 | 577 | 1 | 581 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 259 | 572 | 2 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 262 | 571 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-22 | 276 | 484 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-22 | 276 | 484 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-22 | 276 | 484 | 18 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |