| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G061500.1 |
| Family | CE8 |
| Protein Properties | Length: 577 Molecular Weight: 63156 Isoelectric Point: 7.3696 |
| Chromosome | Chromosome/Scaffold: 05 Start: 4311640 End: 4315038 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 264 | 568 | 0 |
| VTVCKNGNDNGCYKTVQEAVNTAPDNEWGRRYVISIKEGVYDEIVRVPLEKKNVVFLGDGMGKTVITGSLTAGQPGISTYNTATVGVLGDGFMARGLTIQ NTAGAPTHQAVAFRSDGDLSIIENCEFLGSQDTLYAHSLRQFYKSCRIEGNVDFIFGNSAAIFQDCQILVRPRQENPEKGETNAVTAHGRTDPAQSTGFV FQNCLINGTEEYMALYRSNPSVHKNFLGRPWKEYSRTVFIRCNLEALVTPQGWLPWSGGFALETLYYGEFENSGPGSNSSQRVTWSSQIPAQHVDAYSVQ NFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MTTLTTKLRK PRNFLHIFMA SLLSFSLLSL FLFLSLSSSA TLKINHQPPT KQEQKQISKP 60 PSFATTTPPG ILQACKATRL QDTCVSSLSN ANVPQNPTPL QIIQSAISVS DTNLKTAQSM 120 VKSILESSAG NIDRTTAAKN CMEVLNNSQY RITRSARDAL PRGKIKDARA WMSAALLYQY 180 DCSNALKYAN DTSLTNQTMS FLDTLMSFSS NALSMIVSYD AFGNDTKSWG PPKTERDGVW 240 ELGSGGDFGS EFRGGIPSNL TPDVTVCKNG NDNGCYKTVQ EAVNTAPDNE WGRRYVISIK 300 EGVYDEIVRV PLEKKNVVFL GDGMGKTVIT GSLTAGQPGI STYNTATVGV LGDGFMARGL 360 TIQNTAGAPT HQAVAFRSDG DLSIIENCEF LGSQDTLYAH SLRQFYKSCR IEGNVDFIFG 420 NSAAIFQDCQ ILVRPRQENP EKGETNAVTA HGRTDPAQST GFVFQNCLIN GTEEYMALYR 480 SNPSVHKNFL GRPWKEYSRT VFIRCNLEAL VTPQGWLPWS GGFALETLYY GEFENSGPGS 540 NSSQRVTWSS QIPAQHVDAY SVQNFIQGDE WIPTSS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02713 | PLN02713 | 1.0e-110 | 60 | 575 | 564 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 2.0e-111 | 45 | 576 | 564 | + Putative pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 8.0e-115 | 65 | 572 | 529 | + pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 3.0e-158 | 263 | 569 | 310 | + Pectinesterase. |
| PLN02708 | PLN02708 | 0 | 48 | 576 | 533 | + Probable pectinesterase/pectinesterase inhibitor |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002275192.1 | 0 | 64 | 573 | 33 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281640.1 | 0 | 57 | 576 | 38 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 40 | 576 | 22 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 39 | 576 | 23 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 54 | 576 | 29 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 258 | 576 | 3 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 260 | 572 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-20 | 261 | 574 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-20 | 261 | 574 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-20 | 261 | 574 | 3 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
