| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G069200.1 |
| Family | GH35 |
| Protein Properties | Length: 716 Molecular Weight: 80501.6 Isoelectric Point: 4.8995 |
| Chromosome | Chromosome/Scaffold: 05 Start: 4958844 End: 4966523 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 32 | 336 | 0 |
| LIIDGQRKILFSGSIHYPRSTPEMWPSLVAKAREGGVDVIQTYVFWNLHEPRPGEYDFSGRNDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLH DVPDIVYRSDNEPFKFYMQNFTTKIVNMMKSEGLYASQGGPIILSQIENEYQNVEAAFRDKGPPYVIWAAKMAVELQTGVPWVMCKQTDAPDPVINTCNG MRCGETFGGPNSPTKPSLWTENWTSFYQVYGGEPYIRSAEDIAFHVTLFIAKNGSYINYYMFHGGTNFGRTASAYVITSYYDQAPLDEYGLIRQPKWGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 716 Download |
| MGWWLSWVVL TVAVIRDIVV RGGDVTYDGR SLIIDGQRKI LFSGSIHYPR STPEMWPSLV 60 AKAREGGVDV IQTYVFWNLH EPRPGEYDFS GRNDLVRFIK EIQAQGLYVC LRIGPFIESE 120 WTYGGFPFWL HDVPDIVYRS DNEPFKFYMQ NFTTKIVNMM KSEGLYASQG GPIILSQIEN 180 EYQNVEAAFR DKGPPYVIWA AKMAVELQTG VPWVMCKQTD APDPVINTCN GMRCGETFGG 240 PNSPTKPSLW TENWTSFYQV YGGEPYIRSA EDIAFHVTLF IAKNGSYINY YMFHGGTNFG 300 RTASAYVITS YYDQAPLDEY GLIRQPKWGH LKELHAAIKS CSSTILEGVQ SNFSLGQLQQ 360 AYIFEEEGAG CAAFLVNNDQ KNNATVEFRN ITFELLPKSI SVLPDCENII FNTAKVNAKG 420 NEITRTSSQL FDDADRWEAY TDVIPNFADT NLKSDTLLEH MNTTKDKSDY LWYTFSFLPN 480 SSCTEPILHV ESLAHVASAF VNNKYAGSAH GSKDAKGPFT MEAPIVLNDQ MNTISILSTM 540 VGLQDSGAFL ERRYAGLTRV EIRCAQQEIY NFTNNYEWGY QAGLSGESLN IYMREHLDNI 600 EWSEVVSATD QPLSWFKIEF DAPTGNDPVV LNLSTMGKGE AWVNGQSIGR YWLSFLTSKG 660 QPSQTLYHIP RAFLNSSGNL LVLLEESGGD PLHISLDTVS RTGLQEHASR YHPPQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 4.0e-8 | 431 | 543 | 115 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 7.0e-23 | 25 | 306 | 326 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-154 | 31 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 25 | 702 | 710 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82672.1 | 0 | 21 | 707 | 22 | 679 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 26 | 714 | 33 | 719 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 20 | 715 | 21 | 721 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 20 | 715 | 57 | 750 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307056.1 | 0 | 1 | 715 | 1 | 715 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-38 | 31 | 334 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.001 | 601 | 688 | 497 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-30 | 15 | 321 | 1 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-30 | 15 | 321 | 1 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
