Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.005G078500.1 |
Family | GH5 |
Protein Properties | Length: 496 Molecular Weight: 55762.4 Isoelectric Point: 4.6162 |
Chromosome | Chromosome/Scaffold: 05 Start: 5775916 End: 5779172 |
Description | |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 209 | 478 | 9.94922e-44 |
QVLQDHWNSYITDEDFRFMSANGLNAVRIPVGWWIACDPPPKPFVSGSLKALDNAFTWAQEYGMKVIVDLHAIQGSQNGNGHSGTRDGYQEWGDSNIQDT VAVIDFLAERYANNTSLAAIELMNEPMAPGISLDTLKKYYQAGYDAVRKYTQNAYVILSNRLGNADAKELLSFASSLHCVAIDVHYYNLFSDSFSNMNAQ QNIDFIHNQRSSDLDTVTTANGPSIFVGAWTGEWEVNGASMEDYQNFAKAQIEVYGRAQFGWAYWAYKCA |
Full Sequence |
---|
Protein Sequence Length: 496 Download |
MAYYLLVFPL LLLLCAPSPS LAQPFKAVNL GNWLVNEGWM DPSLYDGMPN NDLLDGTQVR 60 FFSTRLQKYL CSENGGGTIL VANRPSASDW ETFRLWRINE TYFNFRVFNK QFVGLEDQGN 120 KVTAFSDTAG NRETFQIIRK NDDRSIVRLQ ASNGQFLQAI SETLVTADYV GSGWDDGDPS 180 VFKMTIVNPN AIRGEYQLTN GYGTDRAPQV LQDHWNSYIT DEDFRFMSAN GLNAVRIPVG 240 WWIACDPPPK PFVSGSLKAL DNAFTWAQEY GMKVIVDLHA IQGSQNGNGH SGTRDGYQEW 300 GDSNIQDTVA VIDFLAERYA NNTSLAAIEL MNEPMAPGIS LDTLKKYYQA GYDAVRKYTQ 360 NAYVILSNRL GNADAKELLS FASSLHCVAI DVHYYNLFSD SFSNMNAQQN IDFIHNQRSS 420 DLDTVTTANG PSIFVGAWTG EWEVNGASME DYQNFAKAQI EVYGRAQFGW AYWAYKCAAN 480 YWSLKWMIEN NYIKL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.001 | 57 | 168 | 112 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
cd00257 | Fascin | 5.0e-5 | 103 | 169 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 2.0e-16 | 214 | 475 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 5.0e-26 | 176 | 492 | 359 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18831.1 | 0 | 2 | 495 | 12 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 2 | 495 | 12 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 2 | 476 | 12 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306319.1 | 0 | 26 | 493 | 1 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002309987.1 | 0 | 40 | 495 | 1 | 455 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 2e-34 | 195 | 411 | 45 | 265 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 4e-34 | 195 | 416 | 45 | 270 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 4e-34 | 195 | 416 | 45 | 270 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 3n9k_A | 4e-34 | 195 | 411 | 50 | 270 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 2pb1_A | 5e-34 | 195 | 411 | 51 | 271 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |