CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.005G148800.1
FamilyGH43
Protein PropertiesLength: 477 Molecular Weight: 54312.4 Isoelectric Point: 7.3285
ChromosomeChromosome/Scaffold: 05 Start: 13262409 End: 13267249
Descriptionglycosyl hydrolase family protein 43
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431643933.2e-33
  LYDESSRTYYWYGEYKDGPTYHAHKKGAARVDIIGVGCYSSKDLWAWKNEGIVLEAEEANETCDLHKSNVLERPKVIYNEKTGKYVMWMHIDDANYTKAA
  VGIAISDYPTGPFNYLHSKQPHGFDSRDMTIFKDDDGVAYIIYSSEDNSELHIGPLTEDYLDVTHVVRRILIGQHREAPALFKYQGTYYMITSGCTGWAP
  NEALAHAAESIMGPWETMGNPCVGGNKMFR
Full Sequence
Protein Sequence     Length: 477     Download
MELKRGEKMT MRNKYRKPTT FHCNAGSRCS PSVVVWSLVG FLLSLHLYSL VSHNGGKVGD    60
VQFHTSHHTL FRELEEVEEE NIQIPPPKGK RSPRAAKRRP KRPTTLIDEF LDENSQLRHV    120
FFPDMKTAID PMNDSGNDSF NYYPGRIWLD TEGNPIQAHG GGILYDESSR TYYWYGEYKD    180
GPTYHAHKKG AARVDIIGVG CYSSKDLWAW KNEGIVLEAE EANETCDLHK SNVLERPKVI    240
YNEKTGKYVM WMHIDDANYT KAAVGIAISD YPTGPFNYLH SKQPHGFDSR DMTIFKDDDG    300
VAYIIYSSED NSELHIGPLT EDYLDVTHVV RRILIGQHRE APALFKYQGT YYMITSGCTG    360
WAPNEALAHA AESIMGPWET MGNPCVGGNK MFRQTTFFAQ GTYVFPLTGL PGSFVFIADR    420
WNPADLRDSR YVWLPLIVGG PADRPLDYDF GFPVWSRVSI YWHRKWRLPS GRRGLK*       480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_24.0e-14237384166+
cd09004GH43_bXyl6.0e-18200383196+
cd08990GH43_AXH_like4.0e-18201382196+
cd08978GH_F6.0e-45171436277+
cd08985GH43_65.0e-127156436282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU19498.102647115460unknown [Glycine max]
EMBLCBI33680.1094761434unnamed protein product [Vitis vinifera]
RefSeqNP_190557.10104723461glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.205746951466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.10447627499beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F015043650328A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese
PDB3vt2_E015043650328A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese
PDB3vt2_D015043650328A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese
PDB3vt2_C015043650328A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese
PDB3vt2_B015043650328A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8561533351394730
GO3743623381374690
EY7037302951534470
GO8017532961764710
GT7395993021404410
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny