| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G167800.1 |
| Family | GH5 |
| Protein Properties | Length: 507 Molecular Weight: 56463.2 Isoelectric Point: 5.4927 |
| Chromosome | Chromosome/Scaffold: 05 Start: 17754956 End: 17757757 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 221 | 497 | 3.30006e-41 |
| RDHWRTFIVEDDFKFISQNGINAVRIPVGWWIASDPTPPQPYVGGSLKALDNAFLWAQNYGLQVVIDLHAAPGSQNGWEHSSSRDGSQEWGQTDENIRQT VDVIDFLTARYAKSPSLYAVELMNEPRAPGASLDSMTKYYKGGYDAVRKHSSTAYVVMSNRLSSDDPREFFPLASGLTGSVIDVHYYNLFSDEFNSMSVQ QNIDFINTNRSGQLNYVTTSNGPLTFVGEWVEWVAEWTVQGATKEDYQRFAEAQLKVFGRATFGWAYWTLKNVNNHW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 507 Download |
| MAAMYSTRQL LAVCVVALSF YLSHGRVNPS FKINAVNLGG WLVTEGWIKP SLFDGITNKD 60 FLDGTGLQFK SVTVGKYLCA EAGGGNIIVA NRTSASGWET FSLWRINETN FNFRVFNKQF 120 AGLDTNGNGI DIVAVSSTPG RSETFEIVRN SNDTSRVRIK ASNGFFLQAK TEELVTADYA 180 GDNKWGDDDP SVFVMTIAGR LQGEFQVTNG YGPKLAPKVM RDHWRTFIVE DDFKFISQNG 240 INAVRIPVGW WIASDPTPPQ PYVGGSLKAL DNAFLWAQNY GLQVVIDLHA APGSQNGWEH 300 SSSRDGSQEW GQTDENIRQT VDVIDFLTAR YAKSPSLYAV ELMNEPRAPG ASLDSMTKYY 360 KGGYDAVRKH SSTAYVVMSN RLSSDDPREF FPLASGLTGS VIDVHYYNLF SDEFNSMSVQ 420 QNIDFINTNR SGQLNYVTTS NGPLTFVGEW VEWVAEWTVQ GATKEDYQRF AEAQLKVFGR 480 ATFGWAYWTL KNVNNHWSLE WMIKNG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 2.0e-7 | 69 | 178 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 8.0e-12 | 223 | 492 | 285 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 3.0e-27 | 212 | 506 | 337 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18831.1 | 0 | 28 | 506 | 30 | 501 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001064458.1 | 0 | 26 | 506 | 31 | 504 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285806.1 | 0 | 6 | 506 | 5 | 504 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464704.1 | 0 | 27 | 506 | 37 | 510 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| RefSeq | XP_002513884.1 | 0 | 3 | 506 | 2 | 502 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-35 | 204 | 506 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pb1_A | 2e-35 | 204 | 506 | 51 | 382 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 2pc8_A | 2e-35 | 204 | 506 | 51 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
