Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G168500.1 |
Family | GH3 |
Protein Properties | Length: 774 Molecular Weight: 84741.5 Isoelectric Point: 7.7882 |
Chromosome | Chromosome/Scaffold: 05 Start: 17892563 End: 17899118 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 76 | 328 | 0 |
IPRLGIPGYQWWSEALHGVAYAGPGIRFNGTIKRATSFPQVILSAASFDANQWYRISQAIGKEARALYNAGQATGMTFWAPNINIFRDPRWGRGQETPGE DPLMTGKYAVSYVRGLQGDSFKGGEIKGPLQASACCKHFTAYDLENWNGTSRYVFDAYVTAQDLADTYQPPFKSCVEEGRASGIMCAYNRVNGIPNCADS NFLSRTARAQWGFDGYIASDCDAVSIIHDAQGYAKTPEDAVVAVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 774 Download |
MRPQNLRFFT FTIFTVIVLQ VDSTQPPFSC DSSNPSTKTF PFCKTTLPIS QRANDLVSRL 60 TLEEKISQLV NSAQPIPRLG IPGYQWWSEA LHGVAYAGPG IRFNGTIKRA TSFPQVILSA 120 ASFDANQWYR ISQAIGKEAR ALYNAGQATG MTFWAPNINI FRDPRWGRGQ ETPGEDPLMT 180 GKYAVSYVRG LQGDSFKGGE IKGPLQASAC CKHFTAYDLE NWNGTSRYVF DAYVTAQDLA 240 DTYQPPFKSC VEEGRASGIM CAYNRVNGIP NCADSNFLSR TARAQWGFDG YIASDCDAVS 300 IIHDAQGYAK TPEDAVVAVL KAGMDVNCGS YLQQHTKAAV DQKKLTISEI DRALHNLFSV 360 RMRLGLFNGN PTGQQFGNIG PDQVCSQENQ ILALDAARNG IVLLKNSAGL LPLSKSKTMS 420 LAVIGPNANS VQTLLGNYAG PPCKLVTPLQ ALQSYIKHTI PYPGCDSVQC SSASIVGAVN 480 VAKGADHVVL IMGLDDTQEK EGLDRRDLVL PGKQQELIIS VAKAAKNPVV LVLLSGGPVD 540 ISFAKNDKNI GSILWAGYPG EAGAIALAEI IFGDHNPGGK LPMTWYPQEF VKVPMTDMRM 600 RPETSSGYPG RTYRFYKGPT VFEFGYGLSY SKYTYELRAV SQNKLYLNQS STMHKINNFD 660 SVLSLLVSEL GTEFCEHNKF PVRIEVKNHG EMAGKHPVLL FARQTKQGNG RPRKQLVGFH 720 SVQLSAGERA EIEFEVSPCE HLSRTNEDGL MVMEEGTHFL VVEGQEYPIS IVI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-53 | 401 | 631 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 8.0e-54 | 64 | 430 | 372 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 7.0e-62 | 61 | 353 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 6.0e-76 | 32 | 738 | 786 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 23 | 773 | 762 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19138.1 | 0 | 23 | 772 | 693 | 1410 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285805.1 | 0 | 1 | 773 | 1 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 1 | 773 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 773 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 773 | 1 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 133 | 764 | 106 | 723 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u48_A | 0 | 133 | 764 | 106 | 723 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_B | 0 | 133 | 764 | 106 | 723 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_A | 0 | 133 | 764 | 106 | 723 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2x41_A | 3.9937e-43 | 51 | 771 | 2 | 698 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |