| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G180600.1 |
| Family | GH35 |
| Protein Properties | Length: 777 Molecular Weight: 86720.5 Isoelectric Point: 9.0343 |
| Chromosome | Chromosome/Scaffold: 05 Start: 19685017 End: 19691949 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 33 | 337 | 0 |
| LIINGQHKILFSGSIHYPRSTPDMWSSLISKAKAGGIDVIQTYVFWNLHEPQQGQFYFNGRADLVRFVKEIQAQGLYACLRIGPFIESEWTYGGLPFWLH DIPGMVYRSDNQPFKYHMKRFVSRIVNMMKSEKLYASQGGPIILSQVENEYKNVEAAFHEKGPSYVRWAALMAVNLQTGVPWVMCKQDDAPDPVINSCNG MRCGETFAGPNSPNKPSIWTEDWTSFYQVYGEETYMRSAQDIAFHVALFIAKTGSYVNYYMYHGGTNFGRTASAFTITSYYDQAPLDEYGLIRQPKWGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 777 Download |
| MVRMLYWFTA ILLLWTATGT VRGGNVTYDG RSLIINGQHK ILFSGSIHYP RSTPDMWSSL 60 ISKAKAGGID VIQTYVFWNL HEPQQGQFYF NGRADLVRFV KEIQAQGLYA CLRIGPFIES 120 EWTYGGLPFW LHDIPGMVYR SDNQPFKYHM KRFVSRIVNM MKSEKLYASQ GGPIILSQVE 180 NEYKNVEAAF HEKGPSYVRW AALMAVNLQT GVPWVMCKQD DAPDPVINSC NGMRCGETFA 240 GPNSPNKPSI WTEDWTSFYQ VYGEETYMRS AQDIAFHVAL FIAKTGSYVN YYMYHGGTNF 300 GRTASAFTIT SYYDQAPLDE YGLIRQPKWG HLKELHAAIK SCSKLLLHGA HKTFSLGPLQ 360 QAYVFQGNSG QCAAFLVNND GKQEVEVLFQ SNSYKLPQKS IGILPDCKTM TFNTAKFNSV 420 GKWEEYNEPI PEFDKTSLRA NRLLEHMSTT KDTSDYLWYT FRFQQNLPNA QSVFNAQSHG 480 HVLHAYVNGV HAGFGHGSHQ NTSFSLQTTV RLKNGTNNVA LLSATVGLPV SLFVGAYLER 540 RVAGLRRVRI QNKDFTTYTW GYQVGLLGER LQIYTENGSN KVKWNKLGTN RPLMWYKTLF 600 DAPAGNDPVA LNLGSMGKGE AWVNGQSIGR YWVSFHTSQG SPSQTWYNIP RAFLKPTGNL 660 LVLLEEEKGY PPGITVDTVS VTKVCGYASE SHLSAVQLSC PPKRNISSII FASFGTPSGN 720 CESYAIGNCH SSSSKANVEK ACIGKRSCSI PQSNHFFGGD PCPGIPKVLL VEAKCT* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 4.0e-5 | 446 | 529 | 87 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 3.0e-21 | 26 | 301 | 322 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 9.0e-24 | 698 | 775 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-148 | 32 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 15 | 776 | 828 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 1 | 776 | 1 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 27 | 775 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 23 | 776 | 5 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 25 | 776 | 1 | 764 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520337.1 | 0 | 22 | 776 | 36 | 771 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 7e-38 | 32 | 335 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 5e-29 | 35 | 322 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.003 | 611 | 674 | 523 | 579 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 5e-29 | 35 | 322 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
