Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G188500.1 |
Family | GH9 |
Protein Properties | Length: 482 Molecular Weight: 53510.8 Isoelectric Point: 6.1931 |
Chromosome | Chromosome/Scaffold: 05 Start: 20598558 End: 20601819 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 128 | 444 | 0 |
ALNQALMFFDAQKSGNYPSNSPVKFRGSSGLQDGNTSNPPADLKGGFYDSGKNIKFSFPTAYTITLLSWTVIEYHDKYDSIGELDHVGSNHTNGYNDVTC WQRPEDMNYTRPVSVCNETASDLAGEIMAALSAASIVFKDDTGYSIKLIQSAEKLFEVATKNDTGHHQGTYTAVEDCGGEARMYYDSSGYQDELIWGGTW LFFATGNTSYLGYATSNFSAAEGEETASELGVFYWNNKLTANAVLLTRLRYFHDLGYPYEVGLGSSSNKIDLLICSYLSREIYSRTPGGLILLRPDHGEP LQFAATASFLGKLYSRS |
Full Sequence |
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Protein Sequence Length: 482 Download |
MINSIGSPTH TSASHEDRNY ASDIDHQPVR FVHTISEAGR LLPSASQWNS IELDFHLAPQ 60 SNTTYDSLPS RYSKSFDYEL VITDKKYFKR FVYVSILIVF VVLAIVLLVQ FLPHKHKHHG 120 KSKNITLALN QALMFFDAQK SGNYPSNSPV KFRGSSGLQD GNTSNPPADL KGGFYDSGKN 180 IKFSFPTAYT ITLLSWTVIE YHDKYDSIGE LDHVGSNHTN GYNDVTCWQR PEDMNYTRPV 240 SVCNETASDL AGEIMAALSA ASIVFKDDTG YSIKLIQSAE KLFEVATKND TGHHQGTYTA 300 VEDCGGEARM YYDSSGYQDE LIWGGTWLFF ATGNTSYLGY ATSNFSAAEG EETASELGVF 360 YWNNKLTANA VLLTRLRYFH DLGYPYEVGL GSSSNKIDLL ICSYLSREIY SRTPGGLILL 420 RPDHGEPLQF AATASFLGKL YSRSGVSCSS KFYSVEMLRE FSISQASIYS ANFSLSNPYS 480 I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02909 | PLN02909 | 1.0e-56 | 118 | 465 | 381 | + Endoglucanase | ||
PLN02171 | PLN02171 | 1.0e-56 | 128 | 465 | 371 | + endoglucanase | ||
PLN02613 | PLN02613 | 5.0e-60 | 128 | 465 | 373 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-72 | 124 | 465 | 369 | + Glycosyl hydrolase family 9. | ||
PLN02345 | PLN02345 | 2.0e-75 | 128 | 466 | 382 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ63883.1 | 0 | 25 | 467 | 8 | 485 | cellulase [Medicago truncatula] |
EMBL | CAN71528.1 | 0 | 23 | 469 | 12 | 502 | hypothetical protein [Vitis vinifera] |
EMBL | CBI19980.1 | 0 | 23 | 442 | 12 | 464 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002278065.1 | 0 | 23 | 467 | 12 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526151.1 | 0 | 22 | 467 | 6 | 482 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 8e-37 | 129 | 465 | 9 | 334 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1ksc_A | 8e-37 | 129 | 465 | 9 | 334 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1ks8_A | 8e-37 | 129 | 465 | 9 | 334 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 1e-33 | 124 | 443 | 5 | 331 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 1e-33 | 124 | 443 | 5 | 331 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |