| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.005G200600.2 |
| Family | AA1 |
| Protein Properties | Length: 498 Molecular Weight: 55720.1 Isoelectric Point: 7.2274 |
| Chromosome | Chromosome/Scaffold: 05 Start: 21614703 End: 21618708 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 8 | 480 | 0 |
| NINTVNPRHGVKQPKYPWSDGPEYITQCPIQPGGKFSQRVIFSNEEGTLWWHAHSDWTRATVYGAIVIYPKKGTEYPFPMPHADVPIILGEWWKKDIFEI FDQFRASGADPDVSDAYTINGQPGDLYPCSKSDTFKLSVDYGKTYLLRLINAALQDILFFSITNHQVTVVGTDASYTKPLKVDYIAISPGQTIDVLLEAN QPLDHYYMAAKVYSSANGVQYDNTTATAIVQYNGNYTPSSTPSLPYLPYFNDTTASVNFTGRLRSLADNNHPIYVPMSISTPLFFTVSVNIFTCANTSCG ANQSRLAASVNNISFQTPTRMDILRAYYNQINGVYGDHFPDKPPLFFNFTADTIPLIYKTPSKGTEVKVLEYNSTVEIVFQGTNVAAGTDHPMHIHGTSF YVVGWGFGNFDKDKDPLRYNLVDPPLQNTIVIPKNGWSVIRFKATNPGVWFVHCHLERHLSWGMEMAFIIKNG | |||
| Full Sequence |
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| Protein Sequence Length: 498 Download |
| MHGGRDNNIN TVNPRHGVKQ PKYPWSDGPE YITQCPIQPG GKFSQRVIFS NEEGTLWWHA 60 HSDWTRATVY GAIVIYPKKG TEYPFPMPHA DVPIILGEWW KKDIFEIFDQ FRASGADPDV 120 SDAYTINGQP GDLYPCSKSD TFKLSVDYGK TYLLRLINAA LQDILFFSIT NHQVTVVGTD 180 ASYTKPLKVD YIAISPGQTI DVLLEANQPL DHYYMAAKVY SSANGVQYDN TTATAIVQYN 240 GNYTPSSTPS LPYLPYFNDT TASVNFTGRL RSLADNNHPI YVPMSISTPL FFTVSVNIFT 300 CANTSCGANQ SRLAASVNNI SFQTPTRMDI LRAYYNQING VYGDHFPDKP PLFFNFTADT 360 IPLIYKTPSK GTEVKVLEYN STVEIVFQGT NVAAGTDHPM HIHGTSFYVV GWGFGNFDKD 420 KDPLRYNLVD PPLQNTIVIP KNGWSVIRFK ATNPGVWFVH CHLERHLSWG MEMAFIIKNG 480 RGKKAQMLPP PPYMPPC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 2.0e-39 | 91 | 242 | 156 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02191 | PLN02191 | 4.0e-49 | 16 | 476 | 492 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-57 | 16 | 475 | 492 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-67 | 16 | 475 | 499 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 16 | 497 | 483 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002264394.1 | 0 | 16 | 497 | 86 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264702.1 | 0 | 16 | 497 | 82 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264812.1 | 0 | 16 | 497 | 57 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307536.1 | 0 | 16 | 488 | 37 | 509 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307537.1 | 0 | 16 | 497 | 84 | 565 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 16 | 481 | 62 | 530 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 16 | 481 | 62 | 530 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 16 | 481 | 62 | 530 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 16 | 481 | 62 | 530 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 16 | 481 | 62 | 530 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 485 | 16 | 498 | 0 |
| BU884116 | 226 | 234 | 459 | 0 |
| HS392664 | 218 | 24 | 241 | 0 |
| FN754804 | 240 | 260 | 498 | 0 |
| EH772337 | 269 | 16 | 284 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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