Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G229600.1 |
Family | GH5 |
Protein Properties | Length: 421 Molecular Weight: 47702.2 Isoelectric Point: 6.6423 |
Chromosome | Chromosome/Scaffold: 05 Start: 23849595 End: 23852752 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 41 | 360 | 1.3e-34 |
GSPFYANGFNGYWLMYFATDTSQRDKVTSVFQDAKQHGLTLARTWAFNDGQDRALQVSPGHYNEQTFQGLDFVISEAKKNGIKLILSLVNNYENFGGRKQ YVNWASSQGQSISSLDDFYTNSVVKGYYKNHIKTVLTRRNSITGVAYKDEPTIMAWELMNEPRCASDPSGRTIQAWITEMASYLKSIDGNHLLEVGLEGF YGPSSSEKQQSNPNFQVGTDFIANNQIPDIDFATVHSYPDQWLPDSSEESQESFLNSWLNNHIQDSQNILRKPVLFAEFGKSLRTSNDNQRDRLFNTVYS AIYSSASSGGAAAGGMFWQL |
Full Sequence |
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Protein Sequence Length: 421 Download |
MRHWGLIFLV ILLIQEQGIF LQVEADDGFI RTKGVQFLLN GSPFYANGFN GYWLMYFATD 60 TSQRDKVTSV FQDAKQHGLT LARTWAFNDG QDRALQVSPG HYNEQTFQGL DFVISEAKKN 120 GIKLILSLVN NYENFGGRKQ YVNWASSQGQ SISSLDDFYT NSVVKGYYKN HIKTVLTRRN 180 SITGVAYKDE PTIMAWELMN EPRCASDPSG RTIQAWITEM ASYLKSIDGN HLLEVGLEGF 240 YGPSSSEKQQ SNPNFQVGTD FIANNQIPDI DFATVHSYPD QWLPDSSEES QESFLNSWLN 300 NHIQDSQNIL RKPVLFAEFG KSLRTSNDNQ RDRLFNTVYS AIYSSASSGG AAAGGMFWQL 360 LTEGMDSFRD GYEVVFSQNP STTSVIVDQS QKLNRIRKMY ARLRNIEKWK RAKDIRNNGN 420 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00633 | Glyco_10 | 0.006 | 94 | 202 | 109 | + Glycosyl hydrolase family 10. | ||
pfam00150 | Cellulase | 1.0e-6 | 40 | 332 | 307 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 5.0e-28 | 37 | 322 | 287 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32547.1 | 0 | 1 | 416 | 1 | 416 | endo-1,4-beta-mannosidase protein 1 [Prunus persica] |
GenBank | ACN78664.1 | 0 | 1 | 418 | 1 | 416 | endo-beta-mannanase [Malus x domestica] |
RefSeq | XP_002281804.1 | 0 | 1 | 416 | 1 | 418 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306881.1 | 0 | 1 | 420 | 1 | 420 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510418.1 | 0 | 1 | 416 | 1 | 417 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 25 | 396 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 38 | 403 | 21 | 382 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |