Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G235500.1 |
Family | AA5 |
Protein Properties | Length: 550 Molecular Weight: 60493.3 Isoelectric Point: 8.8843 |
Chromosome | Chromosome/Scaffold: 05 Start: 24307961 End: 24309830 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 27 | 548 | 0 |
AGGGGRWQLLQKNIGIVAMHMQLLNNDRVVIYDRTDFGRSNLSLPGGKCRDDSSEIVIKHDCTAHSVEYDVLANKFRPLMVQTDVWCSSGAVVPDGSLIQ TGGFSDGERKVRTFYPCNGDCDWVETGDGLKAKRWYATNHILPDGKQIIIGGRRQFNYEFYPKTSSPDVYSLPFLLQTNDRGSENNLYPFVFLNSDGNLF IFANNRAILFDYKTGKVVKTYPAIPGGDPRSYPSTGSAVLLPLKNLDAATIEAEVLVCGGAPKGSFEKVAKRNFVKALDTCGRIKINDPNPQWVMETMPY ARVMGDMTLLPNGVVLIINGAGAGTAGWENGRNPVLNPILYWPNGAAGSRFESLNPSTIPRMYHSTAILLRDGRVLVGGSNPHIGYEFNGVLFPTELSLE AFSPPYLDAQNNYLRPTIVSSTASKGKYIGYGQKLLVRFKVTGELMADRISVTMVAPAFNTHSYSMNHRLLVLGNTKVTSVGTSTYDIQVTTPHSGYLAP SGHYILYVVHQYIPSTGIWVKI |
Full Sequence |
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Protein Sequence Length: 550 Download |
MPSSILFFLF LQLFFAIQPC HRVVTSAGGG GRWQLLQKNI GIVAMHMQLL NNDRVVIYDR 60 TDFGRSNLSL PGGKCRDDSS EIVIKHDCTA HSVEYDVLAN KFRPLMVQTD VWCSSGAVVP 120 DGSLIQTGGF SDGERKVRTF YPCNGDCDWV ETGDGLKAKR WYATNHILPD GKQIIIGGRR 180 QFNYEFYPKT SSPDVYSLPF LLQTNDRGSE NNLYPFVFLN SDGNLFIFAN NRAILFDYKT 240 GKVVKTYPAI PGGDPRSYPS TGSAVLLPLK NLDAATIEAE VLVCGGAPKG SFEKVAKRNF 300 VKALDTCGRI KINDPNPQWV METMPYARVM GDMTLLPNGV VLIINGAGAG TAGWENGRNP 360 VLNPILYWPN GAAGSRFESL NPSTIPRMYH STAILLRDGR VLVGGSNPHI GYEFNGVLFP 420 TELSLEAFSP PYLDAQNNYL RPTIVSSTAS KGKYIGYGQK LLVRFKVTGE LMADRISVTM 480 VAPAFNTHSY SMNHRLLVLG NTKVTSVGTS TYDIQVTTPH SGYLAPSGHY ILYVVHQYIP 540 STGIWVKIL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 1.0e-20 | 441 | 548 | 109 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-22 | 441 | 548 | 109 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 3.0e-133 | 45 | 286 | 245 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_173419.1 | 0 | 26 | 548 | 26 | 547 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002280559.1 | 0 | 5 | 548 | 13 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301997.1 | 0 | 27 | 548 | 1 | 523 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315505.1 | 0 | 45 | 549 | 1 | 443 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510488.1 | 0 | 20 | 548 | 22 | 546 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eib_A | 0.000000000000004 | 106 | 548 | 221 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eic_A | 0.000000000000005 | 106 | 548 | 221 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2wq8_A | 0.000000000000006 | 106 | 548 | 243 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 1t2x_A | 0.000000000000006 | 106 | 548 | 221 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2eid_A | 0.000000000000008 | 106 | 548 | 221 | 637 | A Chain A, Galactose Oxidase W290g Mutant |