Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G009400.1 |
Family | GH5 |
Protein Properties | Length: 440 Molecular Weight: 49646.5 Isoelectric Point: 8.8547 |
Chromosome | Chromosome/Scaffold: 06 Start: 614034 End: 617098 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 70 | 393 | 2.1e-31 |
FYVNGWNSYWLMMKSVWSPSRSKVSEMLKRGAQMGLTVCRTWAFSDGRGPDALQVSPGLFNERVFRGLDYVIVEARRNHIRLILSLVNNLAAFGGKNQYV KWAKEAGVNVSLSDDSFFSNPVIKDYYKAYIKAVVKRKNSLSGVRYSEEPAIFAWELMNEPRCASSSSAPVLQAWIAEMAAYIKSLDKRHLVTVGLEGFY GLNTTNKSEVNPGIWAASLGTDFILNSAIDNIDFASVHAYPDSWIPHADLEAKTNYLSNWVDSHISDGDFVLRKPVFFTEVGSRWDVDGKVHERDVLLKI VYDKIYESAKKRQAGAGALIWQLL |
Full Sequence |
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Protein Sequence Length: 440 Download |
MDSQWRAKRL FPFLGILLLL SLLYLDFNNS NSSYFSFPIF LWQPKMGFVS TNSTQFIIID 60 DGGGGRVSAF YVNGWNSYWL MMKSVWSPSR SKVSEMLKRG AQMGLTVCRT WAFSDGRGPD 120 ALQVSPGLFN ERVFRGLDYV IVEARRNHIR LILSLVNNLA AFGGKNQYVK WAKEAGVNVS 180 LSDDSFFSNP VIKDYYKAYI KAVVKRKNSL SGVRYSEEPA IFAWELMNEP RCASSSSAPV 240 LQAWIAEMAA YIKSLDKRHL VTVGLEGFYG LNTTNKSEVN PGIWAASLGT DFILNSAIDN 300 IDFASVHAYP DSWIPHADLE AKTNYLSNWV DSHISDGDFV LRKPVFFTEV GSRWDVDGKV 360 HERDVLLKIV YDKIYESAKK RQAGAGALIW QLLVEDVDGY SDQFSFVPQY SPSTYKLIEE 420 QSCRLQRISA GHNRARKPE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.006 | 147 | 365 | 240 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 8.0e-23 | 103 | 415 | 323 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77937.1 | 0 | 1 | 437 | 1 | 434 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33116.1 | 0 | 1 | 437 | 1 | 432 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272403.1 | 0 | 1 | 437 | 1 | 434 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307872.1 | 0 | 46 | 439 | 1 | 395 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520563.1 | 0 | 1 | 434 | 1 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 48 | 429 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 5.04467e-44 | 74 | 428 | 31 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 5.04467e-44 | 74 | 428 | 31 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 5.04467e-44 | 74 | 428 | 31 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 5.04467e-44 | 74 | 428 | 31 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |