Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G011300.1 |
Family | GT31 |
Protein Properties | Length: 684 Molecular Weight: 77798.4 Isoelectric Point: 8.0058 |
Chromosome | Chromosome/Scaffold: 06 Start: 731256 End: 737297 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 451 | 633 | 0 |
ERMAVRKTWMQSSVIKSSNVVARFFVALNPRKEVNAVLKREAAYFGDIVILPFMDRYELVVLKTIAICEFGVRNVSAAYIMKCDDDTFVRVDTVLKEIDR TSPNKSLYMGNLNLLHRPLRNGKWAVTFEEWPEEVYPPYANGPGYVISTDIAKFVIAQHGKRSLRLFKMEDVSMGMWVEQFNS |
Full Sequence |
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Protein Sequence Length: 684 Download |
MKRLKIEPSS TRRCKLSHML LAVGAIYLVF LAFKFPHFLE IASMLSVDDS YAGLDSSSMV 60 KDVEDSDLSK PSFSSVYKDA FHRKLEDNQN QNAPMMPSKE PLEDEKGGSK TIKPLQYRYG 120 RITGEIMRRR NATMKLSPLE RMADEAWLLG LKAWEEVEKY DGEEIGQSLL YEGKIESCPL 180 WVSMSGEELA GGDKMMFLPC GLSAGSSITI VGTPHHAHQE YVPQLARLRN GNGIVMVSQF 240 MIELQGLKSV EGEDPPKILH LNPRLRGDWS QHPVIEHNTC YRMQWGTAQR CDGLPSKKDE 300 DMLVDEHARC EKWMRDDNVD SKESKTASWF KRFIGREQKP EVTWPFPFVE GGLFILTLRA 360 GVDGYHITVG GRHVTSFPYR PGFTLEDATG LAIKGDVDVH SVFATSLPSS HPSFSPQRVL 420 EMSEKWKAHP LPKSPIQLFI GILSATNHFA ERMAVRKTWM QSSVIKSSNV VARFFVALNP 480 RKEVNAVLKR EAAYFGDIVI LPFMDRYELV VLKTIAICEF GVRNVSAAYI MKCDDDTFVR 540 VDTVLKEIDR TSPNKSLYMG NLNLLHRPLR NGKWAVTFEE WPEEVYPPYA NGPGYVISTD 600 IAKFVIAQHG KRSLRLFKME DVSMGMWVEQ FNSSTPVQYS HNWKFCQYGC LENYYTAHYQ 660 SPRQMICLWD KLARGRAQCC SFR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 2.0e-20 | 199 | 402 | 204 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 2.0e-22 | 197 | 403 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 2.0e-24 | 198 | 402 | 205 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 3.0e-28 | 450 | 629 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 9.0e-136 | 153 | 683 | 550 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN60867.1 | 0 | 12 | 683 | 3 | 674 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272405.1 | 0 | 12 | 683 | 3 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308783.1 | 0 | 139 | 683 | 1 | 545 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322528.1 | 0 | 142 | 683 | 1 | 542 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531052.1 | 0 | 1 | 683 | 1 | 683 | transferase, transferring glycosyl groups, putative [Ricinus communis] |