| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G027700.3 |
| Family | GH51 |
| Protein Properties | Length: 582 Molecular Weight: 64309.2 Isoelectric Point: 4.9904 |
| Chromosome | Chromosome/Scaffold: 06 Start: 1856700 End: 1863708 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 220 | 540 | 0 |
| KGVIWFDQVSAMPLETYKGHGFQKELIEMLEDIKPQFIRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQLSEDLGARPI WVFNNGISHRDEVDTTTVSPFVQEALDGLEFARGASDSKWGSVRAAMGHPEPFDLKYVAVGNEDCWKKNYRGNYLKFYDAIKSAYPDIKIISNCDGSSHS LDHPADYYDFHIYTSASHLFSMTHQFDHTSRSGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDIVEMASYAPLFVNDNDRRWNPDAIVFNSS MHYGTPSYWVLKFFRESSGAT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MGYWKASCSV LLVCFFVGLC SVYQCSAAEV DAYQTAKLIV NASSGRPIPE TLFGIFFEEI 60 NHAGAGGIWA ELVSNRGFEA GGQNTPSNIA PWSIIGDQSS LTVSTDRSSC FERNKVALRM 120 HVLCDSEGSN ICPAGGVGIY NPGFWGMNIE QGKIYKVVLY VRSLGSINVS VSLTSSDGLQ 180 ILATANIVDS DVSNWTKTEV LLEAKGTNPN SRLQLTTSRK GVIWFDQVSA MPLETYKGHG 240 FQKELIEMLE DIKPQFIRFP GGCFVEGEWL RNAFRWKESI GPWEERPGHF GDVWMYWTDD 300 GLGYFEFLQL SEDLGARPIW VFNNGISHRD EVDTTTVSPF VQEALDGLEF ARGASDSKWG 360 SVRAAMGHPE PFDLKYVAVG NEDCWKKNYR GNYLKFYDAI KSAYPDIKII SNCDGSSHSL 420 DHPADYYDFH IYTSASHLFS MTHQFDHTSR SGPKAFVSEY AVTGKDAGTG SLLAALAEAG 480 FLIGLEKNSD IVEMASYAPL FVNDNDRRWN PDAIVFNSSM HYGTPSYWVL KFFRESSGAT 540 LLDAKLQTNS SSLVASAITW TNSVDGETYL KIKARESQSF S* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 7.0e-24 | 458 | 572 | 131 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 3.0e-28 | 240 | 382 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 3.0e-31 | 458 | 574 | 126 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF22680.3 | 0 | 20 | 573 | 18 | 576 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 20 | 573 | 18 | 576 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| RefSeq | XP_002307940.1 | 0 | 1 | 573 | 1 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322584.1 | 0 | 1 | 573 | 5 | 570 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 25 | 574 | 29 | 581 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 4e-19 | 239 | 553 | 67 | 393 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3ug5_E | 4e-19 | 239 | 553 | 67 | 393 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3ug5_D | 4e-19 | 239 | 553 | 67 | 393 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3ug5_C | 4e-19 | 239 | 553 | 67 | 393 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3ug5_B | 4e-19 | 239 | 553 | 67 | 393 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
