y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G039500.1 |
Family | GH31 |
Protein Properties | Length: 876 Molecular Weight: 100809 Isoelectric Point: 8.4282 |
Chromosome | Chromosome/Scaffold: 06 Start: 2804356 End: 2808811 |
Description | Glycosyl hydrolases family 31 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH31 | 394 | 860 | 0 |
LNGNSPSEIIENFTETIGRPPELPKWIISGAVVGMQGGTEAVRRVWDELKDHKVPVSAFWLQDWVGQRETMIGSQLWWNWEVDTTRYHGWQQLINDLGAK NINVMTYCNPCLAPTDEKPNQRRNLFEEAKKLDILVKDKYGEPYMVPNTAFDVGMLDLTHPDTAAWFKQVLQEMVDDGVKGWMADFGEGLPVDATLYSGE DPISAHNRYPELWAQINREFVEEWKSGRAGKEREDPEEALVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSSVVGLLSSGISGYAFNHSDIGGYCA VNLPFIKYHRSEELLMRWMELNAFTTVFRTHEGNKPSCNSQFYSNHKTLSHFARCAKLYKAWYFYRIQLVKEAARKGLPVCRHLFLHYPNDRNVHSLSYQ QFLIGTEILVVPVLDKGKKNVKAYFPEGETCSWQHIWSGKLFKEQGSEAWVEAPVGYPPVFIKAGST |
Full Sequence |
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Protein Sequence Length: 876 Download |
MGTLKITKKH HKHLNNPFPS TPRSLPFIQG RLLFNSQTVP PNKIFSVGKD FQLLWSIKNG 60 GSLSIYHQSQ PTKALWSTIP GQAFVTAALC ETEVEESRGS FAIKDRNVYL VCDHQTIEDI 120 RVISEPDHHF DQENDHDLSS GNMSFAQKND WKDTQFPALV ITGWLFSNRR KKRHQESGIY 180 KDIQFETRGP PTCARYWVLF DQKNNNQIGF QVRVGPPNFE FQQRISPTPL GRHRRLRWKL 240 GKIRRRKLGW YRFFTRSRGF VAVSSSSEEE MEMKSAELTE FNRVCITYSS EGNERFYGFG 300 EQFSHMDFKG KRVPIFVQEQ GIGRGDQPIT FAANLVSYRA GGDWSTTYAP SPFYMTSKMR 360 SLYLEGYDYS VFDMTRHDRV QIQIQSNSVR GRILNGNSPS EIIENFTETI GRPPELPKWI 420 ISGAVVGMQG GTEAVRRVWD ELKDHKVPVS AFWLQDWVGQ RETMIGSQLW WNWEVDTTRY 480 HGWQQLINDL GAKNINVMTY CNPCLAPTDE KPNQRRNLFE EAKKLDILVK DKYGEPYMVP 540 NTAFDVGMLD LTHPDTAAWF KQVLQEMVDD GVKGWMADFG EGLPVDATLY SGEDPISAHN 600 RYPELWAQIN REFVEEWKSG RAGKEREDPE EALVFFMRAG FRDSPKWGML FWEGDQMVSW 660 QANDGIKSSV VGLLSSGISG YAFNHSDIGG YCAVNLPFIK YHRSEELLMR WMELNAFTTV 720 FRTHEGNKPS CNSQFYSNHK TLSHFARCAK LYKAWYFYRI QLVKEAARKG LPVCRHLFLH 780 YPNDRNVHSL SYQQFLIGTE ILVVPVLDKG KKNVKAYFPE GETCSWQHIW SGKLFKEQGS 840 EAWVEAPVGY PPVFIKAGST VGETFVENLR NFGIL* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01055 | Glyco_hydro_31 | 3.0e-75 | 396 | 861 | 480 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. | ||
COG1501 | COG1501 | 3.0e-82 | 278 | 859 | 596 | + Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | ||
cd06594 | GH31_glucosidase_YihQ | 9.0e-154 | 411 | 746 | 337 | + YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. | ||
PRK10426 | PRK10426 | 0 | 282 | 865 | 586 | + alpha-glucosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD81144.1 | 0 | 5 | 875 | 15 | 932 | alpha-glucosidase -like [Oryza sativa Japonica Group] |
EMBL | CBI30134.1 | 0 | 1 | 875 | 35 | 905 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266626.1 | 0 | 1 | 875 | 1 | 871 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308887.1 | 0 | 1 | 875 | 1 | 875 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522166.1 | 0 | 1 | 875 | 1 | 874 | alpha-xylosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4kmq_A | 3e-33 | 281 | 861 | 256 | 823 | A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense |
PDB | 4ba0_A | 4e-33 | 288 | 859 | 147 | 670 | A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense |
PDB | 4b9z_A | 4e-33 | 288 | 859 | 147 | 670 | A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense |
PDB | 4b9y_A | 4e-33 | 288 | 859 | 147 | 670 | A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 |
PDB | 1we5_F | 2e-31 | 294 | 830 | 160 | 639 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN524335 | 254 | 381 | 634 | 0 |
JG471720 | 268 | 381 | 648 | 0 |
DT522737 | 245 | 632 | 876 | 0 |
DY975686 | 282 | 479 | 760 | 0 |
DV133191 | 257 | 465 | 721 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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