Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G046100.1 |
Family | GH17 |
Protein Properties | Length: 346 Molecular Weight: 37608.6 Isoelectric Point: 4.8295 |
Chromosome | Chromosome/Scaffold: 06 Start: 3268403 End: 3270121 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 35 | 343 | 0 |
GVCYGTLGDNLPSEQEVVDLFNQYNIRRMRIYDPNPRTLQALGGSSIELMLGVPNSDLPSISSSQANADAWVQNNVLKYSNVKFRYIAVGNEVKPGDDFA PALFPAMQNIQNSISAAGLGNQIKVSTVTFAAALGESYPPSRGVFNAEYHSLLAPIISFLVSNQSPFLVNLYPYFSRAENNDIPLNYALLVPDPSATVSD PPFEYNNLFAAMVDAVYSALEKAGGGSLEIVVSESGWPSAGGGPETNIDNARTYNTNLVQQVKNGTPKRPGRPIETYIFATFDENQKQPEYEKFWGLFLP SKQPKYQIQ |
Full Sequence |
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Protein Sequence Length: 346 Download |
MAKSSASHKT SPMISIVLLA GLLMSCLRIT GAQMGVCYGT LGDNLPSEQE VVDLFNQYNI 60 RRMRIYDPNP RTLQALGGSS IELMLGVPNS DLPSISSSQA NADAWVQNNV LKYSNVKFRY 120 IAVGNEVKPG DDFAPALFPA MQNIQNSISA AGLGNQIKVS TVTFAAALGE SYPPSRGVFN 180 AEYHSLLAPI ISFLVSNQSP FLVNLYPYFS RAENNDIPLN YALLVPDPSA TVSDPPFEYN 240 NLFAAMVDAV YSALEKAGGG SLEIVVSESG WPSAGGGPET NIDNARTYNT NLVQQVKNGT 300 PKRPGRPIET YIFATFDENQ KQPEYEKFWG LFLPSKQPKY QIQLD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 254 | 332 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-138 | 35 | 343 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL30426.1 | 0 | 1 | 345 | 1 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | ACD45060.1 | 0 | 5 | 345 | 6 | 345 | beta-1,3-glucanase [Vitis riparia] |
EMBL | CAA03908.1 | 0 | 16 | 345 | 5 | 336 | beta-1,3-glucanase [Citrus sinensis] |
RefSeq | XP_002277827.1 | 0 | 5 | 345 | 6 | 345 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308921.1 | 0 | 34 | 345 | 1 | 312 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 344 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_C | 0 | 33 | 344 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_B | 0 | 33 | 344 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_A | 0 | 33 | 344 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3em5_D | 0 | 33 | 344 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |