Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G048100.1 |
Family | GH17 |
Protein Properties | Length: 345 Molecular Weight: 37463.6 Isoelectric Point: 4.8548 |
Chromosome | Chromosome/Scaffold: 06 Start: 3435767 End: 3437243 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 342 | 0 |
IGVCYGMLGNLPPRPEVIALYNERGIQRMRLYDPDQDALRALGGTNIELILGILNPDLQGIASSQDNANAWVQNNVRNFGNVRFRYIAVGNEVKPSDSSA QFLVPAMQNIRNALDSAGLGSIKVSTAIDPEVLTDDSFPPSKGSFRAEYRPLLDPIIRFLVDKQSPLLVNLYPYFTYSGDTAGNIPLDYALFTAPSSPVS DPPLNYQNLFDAILDTIYAALEKSGGGSLDIVVSESGWPTAGGKGTSVDNARTYNNNLVQHVKTGSPKRPGKPIETYIFAMFDEVNKSPELEKNWGLFFP NKQPKYQID |
Full Sequence |
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Protein Sequence Length: 345 Download |
MAVSHLAGKS PAMLSMMLLF GILLASLDTA GAQIGVCYGM LGNLPPRPEV IALYNERGIQ 60 RMRLYDPDQD ALRALGGTNI ELILGILNPD LQGIASSQDN ANAWVQNNVR NFGNVRFRYI 120 AVGNEVKPSD SSAQFLVPAM QNIRNALDSA GLGSIKVSTA IDPEVLTDDS FPPSKGSFRA 180 EYRPLLDPII RFLVDKQSPL LVNLYPYFTY SGDTAGNIPL DYALFTAPSS PVSDPPLNYQ 240 NLFDAILDTI YAALEKSGGG SLDIVVSESG WPTAGGKGTS VDNARTYNNN LVQHVKTGSP 300 KRPGKPIETY IFAMFDEVNK SPELEKNWGL FFPNKQPKYQ IDLN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 62 | 331 | 288 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-142 | 34 | 342 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF33405.1 | 0 | 1 | 343 | 1 | 342 | AF230109_1 beta-1,3 glucanase [Populus tremula x Populus alba] |
GenBank | AAL30426.1 | 0 | 8 | 344 | 9 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | ABK58141.1 | 0 | 37 | 344 | 1 | 309 | beta-1,3-glucanase [Manihot esculenta] |
RefSeq | XP_002277827.1 | 0 | 10 | 344 | 11 | 345 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308018.1 | 0 | 1 | 294 | 1 | 294 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 344 | 1 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_C | 0 | 33 | 344 | 1 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_B | 0 | 33 | 344 | 1 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_A | 0 | 33 | 344 | 1 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3em5_D | 0 | 33 | 344 | 1 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |