Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G054800.1 |
Family | GT47 |
Protein Properties | Length: 794 Molecular Weight: 90022 Isoelectric Point: 6.3663 |
Chromosome | Chromosome/Scaffold: 06 Start: 3999084 End: 4007471 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 346 | 699 | 0 |
KKRPLIYIYDLPPKFNSLLLEGRHFKFECVNRLYNDNNATIWTDQLYGAQMALYESILASPYRTLNGEEADFFFVPVLDSCIITRADDAPHLSMEQHLGL RSSLTLEFYRKAYDHIVEHYPFWNRSSGRDHLWSFSWDEGACYAPKEIWNSMMVVHWGNTNSKHNHSTTAYWADNWDKISSDRRGKHPCFDPDKDLVLPA WKRPDVNALSTKLWARPLEKRKTLFYFNGNLGPAYLNGRPEALYSMGIRQKLAEEFGSTPNKDGNLGKQHAENVIVSPLRSESYHEDLASSVFCGVMPGD GWSGRMEDSILQGCIPVVIQDGIYLPYENVLNYESFAVRILEDEIPNLIKILQG |
Full Sequence |
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Protein Sequence Length: 794 Download |
MITISKWKCS WSLMATIASI VALVSVVHLF LFPVVPSFDP FSVWQVQDSC GPNNESVDGR 60 TGHDPGNLQP VLDLEHKFPA DLHRAVFYRN APWKAEIGRW LSGCDAVTKE VSVVETISGR 120 SCKNDCSGQG VCNYELGQCR CFHGFSGEGC SERLHLECNY PKSPELPYGR WVVSICSAHC 180 DPTRAMCFCG EGTKYPNRPA AETCGFQLSL PSEIGAPRQV DWAKPDLDIY TTNKSKLGWC 240 NVDPAEGYAN KVKFKEECDC KYDCLSGRFC EVPVQCSCIN QCSGHGHCRG GFCQCANGWY 300 GTDCSIPSVT SSVREWPRWL RPAQLDVPDN AHLTGKLVDL NAVVKKKRPL IYIYDLPPKF 360 NSLLLEGRHF KFECVNRLYN DNNATIWTDQ LYGAQMALYE SILASPYRTL NGEEADFFFV 420 PVLDSCIITR ADDAPHLSME QHLGLRSSLT LEFYRKAYDH IVEHYPFWNR SSGRDHLWSF 480 SWDEGACYAP KEIWNSMMVV HWGNTNSKHN HSTTAYWADN WDKISSDRRG KHPCFDPDKD 540 LVLPAWKRPD VNALSTKLWA RPLEKRKTLF YFNGNLGPAY LNGRPEALYS MGIRQKLAEE 600 FGSTPNKDGN LGKQHAENVI VSPLRSESYH EDLASSVFCG VMPGDGWSGR MEDSILQGCI 660 PVVIQDGIYL PYENVLNYES FAVRILEDEI PNLIKILQGF NETEIENKLT SVQKIGQRFL 720 YRDSMLLEAE RQKTAFGYVE DWAVEFLRLT EDDVVATFVQ VLHYKLHNDP WRRQLGSQKK 780 DFGLPQECLM RTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.0008 | 276 | 304 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 3.0e-64 | 345 | 700 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 4 | 783 | 5 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 4 | 792 | 33 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277596.1 | 0 | 4 | 792 | 5 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 1 | 793 | 1 | 793 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 67 | 789 | 16 | 725 | catalytic, putative [Ricinus communis] |