Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G067500.1 |
Family | GH17 |
Protein Properties | Length: 399 Molecular Weight: 43861.2 Isoelectric Point: 7.9649 |
Chromosome | Chromosome/Scaffold: 06 Start: 5056393 End: 5060855 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 36 | 354 | 0 |
GINYGRIADNIPSPDEVATLLRAAKIRNVRIYDADHSVLEAFSGTGLQLVVGLPNGYLKDMSANASHAMSWVKENVQAFLPKTSICGIAVGNEVLGGGDN ELWEALLGAVKNVYKAINKLGLADAVQITTAHSQAVFANSYPPSSCIFEENVAQYMKPLLEFFSQIGSPFCLNAYPFLAYTYNPENIDINYALFEKTKGI YDMKTDLHYDNMLDAQIDAAYAALEDAGFKKMEVIVTETGWASRGDDNEAAATVNNARTYNYNLRKRLAKKKGTPLRPKMVVKAYIFAVFNENLKPGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 399 Download |
MKSRRCHHHQ LLFTFLLFFS QKIELLTAEA FTGTYGINYG RIADNIPSPD EVATLLRAAK 60 IRNVRIYDAD HSVLEAFSGT GLQLVVGLPN GYLKDMSANA SHAMSWVKEN VQAFLPKTSI 120 CGIAVGNEVL GGGDNELWEA LLGAVKNVYK AINKLGLADA VQITTAHSQA VFANSYPPSS 180 CIFEENVAQY MKPLLEFFSQ IGSPFCLNAY PFLAYTYNPE NIDINYALFE KTKGIYDMKT 240 DLHYDNMLDA QIDAAYAALE DAGFKKMEVI VTETGWASRG DDNEAAATVN NARTYNYNLR 300 KRLAKKKGTP LRPKMVVKAY IFAVFNENLK PGPTSERNFG LFKPDGSISY DIGFHGLKSS 360 SADSSLLSLK AVQAQGLSKS YILILTISAA ASFLFLKQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-6 | 33 | 345 | 327 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-99 | 36 | 354 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 29 | 370 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 30 | 396 | 29 | 388 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 1 | 397 | 1 | 393 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 27 | 362 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 25 | 398 | 7 | 378 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 36 | 354 | 3 | 315 | A Chain A, Crystal Structure Of The Periplasmic Domain Of Shigella Flexneri Wzzb |
PDB | 3f55_C | 0 | 36 | 354 | 3 | 315 | A Chain A, Crystal Structure Of The Periplasmic Domain Of Shigella Flexneri Wzzb |
PDB | 3f55_B | 0 | 36 | 354 | 3 | 315 | A Chain A, Crystal Structure Of The Periplasmic Domain Of Shigella Flexneri Wzzb |
PDB | 3f55_A | 0 | 36 | 354 | 3 | 315 | A Chain A, Crystal Structure Of The Periplasmic Domain Of Shigella Flexneri Wzzb |
PDB | 3em5_D | 0 | 36 | 354 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |