Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G087500.1 |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 64094.3 Isoelectric Point: 10.4249 |
Chromosome | Chromosome/Scaffold: 06 Start: 6681746 End: 6684722 |
Description | laccase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 567 | 0 |
TRHYKFDIKLQNVTRLCRTKSIVTVNGQIPGPRIIAREGDRLLIKVVNHVQYNVTLHWHGIRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLF WHAHISWLRATLYGPIVILPKKGVSYPFPLPHKEVPIIFGEWWKADTEKIISQALKTGGAPNISDAYTINGHPGLLYNCSAKDTFKLKVKPGKTYLLRLI NAALNDELFFSIANHSLTVVEADAVYVKPFKTHIVLITPGQTTNVLLMAKAKAPNSTFLMAARPYATGPGSFDNTTTAGILEYDQNPSATNSKSKNKKLP LLKPSLPVFNDTTFATKFVKKIRSLANARFPAKVPKKVDRRFFFTIGLGSLPCSQNKTCQGPNNTMFAASVNNVSFVQPNIALLQSHFLNRSKGVYTTDF PTNPPFKFNYTGTPPSNTMTAKGTKVVVLPFNTSVELVMQDTSIIGAESHPLHLHGFNFFVVGQGFGNFDPKKDPVKFNLVDPAERNTVGVPSGGWVAIR FLADNPGVWFMHCHLEVHTSWGLKMAWVVNDGKRPSQ |
Full Sequence |
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Protein Sequence Length: 580 Download |
MGSAFLRILV TALCALWIFS ELVVAKHAGI TRHYKFDIKL QNVTRLCRTK SIVTVNGQIP 60 GPRIIAREGD RLLIKVVNHV QYNVTLHWHG IRQLRSGWAD GPAYVTQCPI QTGQSYVYNF 120 TVTGQRGTLF WHAHISWLRA TLYGPIVILP KKGVSYPFPL PHKEVPIIFG EWWKADTEKI 180 ISQALKTGGA PNISDAYTIN GHPGLLYNCS AKDTFKLKVK PGKTYLLRLI NAALNDELFF 240 SIANHSLTVV EADAVYVKPF KTHIVLITPG QTTNVLLMAK AKAPNSTFLM AARPYATGPG 300 SFDNTTTAGI LEYDQNPSAT NSKSKNKKLP LLKPSLPVFN DTTFATKFVK KIRSLANARF 360 PAKVPKKVDR RFFFTIGLGS LPCSQNKTCQ GPNNTMFAAS VNNVSFVQPN IALLQSHFLN 420 RSKGVYTTDF PTNPPFKFNY TGTPPSNTMT AKGTKVVVLP FNTSVELVMQ DTSIIGAESH 480 PLHLHGFNFF VVGQGFGNFD PKKDPVKFNL VDPAERNTVG VPSGGWVAIR FLADNPGVWF 540 MHCHLEVHTS WGLKMAWVVN DGKRPSQKLP PPPSDLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-53 | 37 | 153 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-67 | 11 | 569 | 594 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-74 | 12 | 570 | 592 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-86 | 31 | 571 | 579 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 579 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30528.1 | 0 | 1 | 579 | 1253 | 1829 | unnamed protein product [Vitis vinifera] |
EMBL | CBI30528.1 | 0 | 16 | 169 | 1 | 154 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271006.1 | 0 | 1 | 579 | 1 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309069.1 | 0 | 1 | 579 | 1 | 579 | laccase 110c [Populus trichocarpa] |
RefSeq | XP_002531562.1 | 0 | 3 | 579 | 10 | 585 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 569 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asq_A | 0 | 32 | 569 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_B | 0 | 32 | 569 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_A | 0 | 32 | 569 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1aso_B | 0 | 32 | 569 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |