y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G096900.1 |
Family | AA1 |
Protein Properties | Length: 559 Molecular Weight: 61311.7 Isoelectric Point: 9.8969 |
Chromosome | Chromosome/Scaffold: 06 Start: 7405751 End: 7409066 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 544 | 0 |
CRVRHYKFNVVMKNTTRLCSRKPIVTVNGRFPGPTLYAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGT LLWHAHILWLRATVHGAMVVLPKRGIPYPFPGPHKEVVVVLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSTCSSQGGFTLPVKSGETYMLR LINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGKYLVAASPFMDSPIAVDNMTATATLQYSGALANSPTTLTTPPPK NATAVANQFTNSLRSLNSRRFPAKVPLNVDHNLFFTVSLGVNPCPSCKAGNGSRVVASINNVTFVMPTTALLQAHFLNISGVFTTDFPAKPPHVFNYTGT PPTNLQTKSGTKVYRLSYNSTVQLVMQDTGIISPENHPIHLHGFNFFAVGRGVGNYNPKTDTKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 559 Download |
MEYACWLRFM LLAVCLFPAL VQCRVRHYKF NVVMKNTTRL CSRKPIVTVN GRFPGPTLYA 60 REDDTVLVKV VNHVKYNVSI HWHGIRQLRT GWADGPAYIT QCPIQPGQSY VYNFTITGQR 120 GTLLWHAHIL WLRATVHGAM VVLPKRGIPY PFPGPHKEVV VVLAEWWKSD TEAVINEALK 180 SGLAPNVSDA HTINGHPGAV STCSSQGGFT LPVKSGETYM LRLINAALNE ELFFKIAGHK 240 LTVVEVDATY VKPFKTDTVL IAPGQTTNVL VTTNKNTGKY LVAASPFMDS PIAVDNMTAT 300 ATLQYSGALA NSPTTLTTPP PKNATAVANQ FTNSLRSLNS RRFPAKVPLN VDHNLFFTVS 360 LGVNPCPSCK AGNGSRVVAS INNVTFVMPT TALLQAHFLN ISGVFTTDFP AKPPHVFNYT 420 GTPPTNLQTK SGTKVYRLSY NSTVQLVMQD TGIISPENHP IHLHGFNFFA VGRGVGNYNP 480 KTDTKKFNLV DPVERNTIGV PSGGWVAIRF RADNPGVWFM HCHLEVHTTW GLKMAFLVDN 540 GKGPKESLLP PPSDLPKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 6.0e-68 | 1 | 548 | 589 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-83 | 6 | 536 | 557 | + oxidoreductase | ||
TIGR03388 | ascorbase | 6.0e-93 | 25 | 548 | 564 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 23 | 558 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 1 | 558 | 1 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 9 | 558 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 1 | 558 | 1 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 1 | 558 | 1 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 7 | 558 | 5 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 536 | 2 | 521 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1asq_A | 0 | 24 | 536 | 2 | 521 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 1asp_B | 0 | 24 | 536 | 2 | 521 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |