Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G097000.1 |
Family | AA1 |
Protein Properties | Length: 560 Molecular Weight: 61285.8 Isoelectric Point: 9.9544 |
Chromosome | Chromosome/Scaffold: 06 Start: 7412934 End: 7415921 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 24 | 545 | 0 |
CRIRHYKFNVVMKNTTRLCSRKPIVTVNGRFPGPTLYAREHDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGT LLWHAHILWLRATVHGALVVLPKRGIPYPFPAPHKEVLVVLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSACSSQGGFTLPVKSGETYMLR LINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTANKNTGKYLVAASPFMDAPIAVDNMTATATLQYSGALANSPTTLTTPPPK NATAVANQFTNSLRSLNSRRFPAKVPLNVDHNLFFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTTALLQAHFLNISGVFTTDFPAKPPHVFNYTGT PPTNLQTKSGTKVYRLSYNSTVQLVMQDTGIISPENHPIHLHGFNFFAVGRGVGNYNPKTDTKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 560 Download |
MEYSNLLIRF MLLAVCLLPA LVECRIRHYK FNVVMKNTTR LCSRKPIVTV NGRFPGPTLY 60 AREHDTVLVK VVNHVKYNVS IHWHGIRQLR TGWADGPAYI TQCPIQPGQS YVYNFTITGQ 120 RGTLLWHAHI LWLRATVHGA LVVLPKRGIP YPFPAPHKEV LVVLAEWWKS DTEAVINEAL 180 KSGLAPNVSD AHTINGHPGA VSACSSQGGF TLPVKSGETY MLRLINAALN EELFFKIAGH 240 KLTVVEVDAT YVKPFKTDTV LIAPGQTTNV LVTANKNTGK YLVAASPFMD APIAVDNMTA 300 TATLQYSGAL ANSPTTLTTP PPKNATAVAN QFTNSLRSLN SRRFPAKVPL NVDHNLFFTV 360 GLGVNPCPSC KAGNGSRVVA SINNVTFVMP TTALLQAHFL NISGVFTTDF PAKPPHVFNY 420 TGTPPTNLQT KSGTKVYRLS YNSTVQLVMQ DTGIISPENH PIHLHGFNFF AVGRGVGNYN 480 PKTDTKKFNL VDPVERNTIG VPSGGWVAIR FRADNPGVWF MHCHLEVHTT WGLKMAFLVD 540 NGKGPKESLL PPPSDLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-73 | 4 | 549 | 587 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 8.0e-90 | 3 | 537 | 561 | + oxidoreductase | ||
TIGR03388 | ascorbase | 9.0e-99 | 26 | 549 | 564 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 24 | 559 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 1 | 559 | 1 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 10 | 559 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 1 | 559 | 1 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 1 | 559 | 1 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 7 | 559 | 4 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 25 | 537 | 2 | 521 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1asq_A | 0 | 25 | 537 | 2 | 521 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1asp_B | 0 | 25 | 537 | 2 | 521 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |