Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G109900.2 |
Family | GH5 |
Protein Properties | Length: 471 Molecular Weight: 53127.8 Isoelectric Point: 5.4316 |
Chromosome | Chromosome/Scaffold: 06 Start: 8571635 End: 8574104 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 83 | 416 | 9.9e-32 |
NDQPFYVNGFNTYWLMVFAADQSTRGKVTEVFQQASSVGLTVCRTWAFNDGQWRALQKSPGVYDEDVFKLALDFVVSEAKKYKIRLILSLTNNWDAYGGK AQYVKWGKATGLNLTSDDDFFSHPTLRSYYKAHAVLNRVNTLTNITYKDDPTIFAWELMNEPRCTSDPSGDKLQSWITDMAVYVKSMDAKHLVEIGLEGF YGPSAPDRAQFNPNSYATQVGTDFIRNHQVLGVDFASVHIYADSWISLTISDSHIQFIKSWMEAHIEDAERYLGMPVVFAEFGVSSKDPGYNTSFRDTMI NTVYKTLLNSTKRGGSGAGSLLWQIFPDGTDYMD |
Full Sequence |
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Protein Sequence Length: 471 Download |
MDTHKRIFGF KIIFFVSIFI LLNECLKCSS FGVMDGDQWD TTAEEVDNHL PSSSSSQGAY 60 ELNDVGEDEW QMVARKGNQF VINDQPFYVN GFNTYWLMVF AADQSTRGKV TEVFQQASSV 120 GLTVCRTWAF NDGQWRALQK SPGVYDEDVF KLALDFVVSE AKKYKIRLIL SLTNNWDAYG 180 GKAQYVKWGK ATGLNLTSDD DFFSHPTLRS YYKAHAVLNR VNTLTNITYK DDPTIFAWEL 240 MNEPRCTSDP SGDKLQSWIT DMAVYVKSMD AKHLVEIGLE GFYGPSAPDR AQFNPNSYAT 300 QVGTDFIRNH QVLGVDFASV HIYADSWISL TISDSHIQFI KSWMEAHIED AERYLGMPVV 360 FAEFGVSSKD PGYNTSFRDT MINTVYKTLL NSTKRGGSGA GSLLWQIFPD GTDYMDDGYA 420 IVLSKSPSTS NIISLHSTRV AIFNSMCSWK CKWGCKKKNP LEALFYHDDL * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.001 | 229 | 385 | 165 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-23 | 113 | 436 | 333 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18019.1 | 0 | 1 | 470 | 1 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 62 | 470 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 59 | 470 | 4 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 60 | 470 | 5 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 470 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 73 | 441 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 81 | 432 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 81 | 432 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 81 | 432 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 81 | 432 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |