y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G131000.1 |
Family | GT43 |
Protein Properties | Length: 360 Molecular Weight: 40316.2 Isoelectric Point: 9.3654 |
Chromosome | Chromosome/Scaffold: 06 Start: 10735255 End: 10739038 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 132 | 335 | 0 |
LANTIRLVPPPLLWIVVEGQSDSDEVSEILRKTGIMYRHLVIKENFTDPEAELDHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTWP VALLSANKNKVTIEGPVCDSSQVIGWHLKKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQNSIKFVKQAALEDETELKGIPPEDCSKIML WRLN |
Full Sequence |
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Protein Sequence Length: 360 Download |
MGSLERSKKK VQLWKKAIVH FGLCFVMGFF TGFAPGGKAS IFSSHVVASN KSQPVEMLHQ 60 QVASTPHASN VNRSLIAESP VPTPLSSKES EPAKFLEKEE EPKPKLLPRR LAIIVTPIST 120 EDPYQGVFLR RLANTIRLVP PPLLWIVVEG QSDSDEVSEI LRKTGIMYRH LVIKENFTDP 180 EAELDHQRNV ALRHIEQHRL SGIVHFAGLS NVYDLGFFDE LRQIEVFGTW PVALLSANKN 240 KVTIEGPVCD SSQVIGWHLK KMNNETDKRP PIHISSFGFN SSILWDPERW GRPSSVQQTS 300 QNSIKFVKQA ALEDETELKG IPPEDCSKIM LWRLNLPVSK SPSYHLSTTG STDASRRKI* 360 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01319 | glmL_fam | 0.005 | 146 | 214 | 71 | + conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968). | ||
pfam03360 | Glyco_transf_43 | 1.0e-62 | 132 | 337 | 221 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 2.0e-82 | 113 | 337 | 231 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 0 | 1 | 340 | 345 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33318.1 | 0 | 1 | 359 | 1 | 359 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
GenBank | AAX33319.1 | 0 | 1 | 345 | 1 | 348 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
GenBank | ABP65661.1 | 0 | 1 | 345 | 1 | 348 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
EMBL | CAI93178.1 | 0 | 1 | 359 | 1 | 363 | glycosyltransferase [Populus balsamifera] |
RefSeq | XP_002326337.1 | 0 | 1 | 359 | 1 | 359 | glycosyl transferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 1e-17 | 115 | 348 | 8 | 241 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 1e-17 | 115 | 348 | 8 | 241 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 1e-17 | 115 | 348 | 8 | 241 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 1e-17 | 115 | 348 | 8 | 241 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 0.000000000007 | 114 | 332 | 7 | 229 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |