Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G134500.1 |
Family | CE8 |
Protein Properties | Length: 529 Molecular Weight: 58637.1 Isoelectric Point: 7.7875 |
Chromosome | Chromosome/Scaffold: 06 Start: 11092480 End: 11095123 |
Description | pectin methylesterase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 215 | 511 | 0 |
NVIVAADGTGNFTKIMDAVAAAPDYSMHRHIIYIKKGVYNEYVDIKKKKWNLMMVGEGMNATIITGNRNFIDGWTTFRSATFAVSGRGFIARDITFENTA GPSKHQAVALRSDSDLSVFFRCEIKSYQDSLYTHTMRQFYRECRVSGTVDFIFGDATAVFQNCQILARKGLPDQKNTVTAHGRKDPNQPTGYSFQFCNIS ADIDLLPYVNSSYTYLGRPWKNFSRTIIMQSYMSNAIRPEGWLEWNGNVYLDTLYYGEYINYGPGAGVGRRVRWPGFHMLNDSTQANNYTVAQFIQG |
Full Sequence |
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Protein Sequence Length: 529 Download |
MTFSHPTRMS KISTLSLFLL LLTFFPPVCT AHASSITDDL QNNCLKVPVN QFVGSLTSTL 60 DIIRDVISII SNFGNVFGDI RLTNAITDCL DLLDFSADEL SWSMSASQNP NGKHNSTGDL 120 SSDLRTWLSA ALVNQDTCIE GFDGTNNILK GLVSGSLNQI TSSVQELLKN VDPHTNSKSS 180 GGGFSGSKSG NNDRFPSWVK HEDRKLLVLN GVTPNVIVAA DGTGNFTKIM DAVAAAPDYS 240 MHRHIIYIKK GVYNEYVDIK KKKWNLMMVG EGMNATIITG NRNFIDGWTT FRSATFAVSG 300 RGFIARDITF ENTAGPSKHQ AVALRSDSDL SVFFRCEIKS YQDSLYTHTM RQFYRECRVS 360 GTVDFIFGDA TAVFQNCQIL ARKGLPDQKN TVTAHGRKDP NQPTGYSFQF CNISADIDLL 420 PYVNSSYTYL GRPWKNFSRT IIMQSYMSNA IRPEGWLEWN GNVYLDTLYY GEYINYGPGA 480 GVGRRVRWPG FHMLNDSTQA NNYTVAQFIQ GNLWLPSTGV RYTAGLEV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 3.0e-167 | 55 | 528 | 482 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 5.0e-175 | 26 | 526 | 508 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 26 | 528 | 506 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 215 | 512 | 298 | + Pectinesterase. | ||
PLN02506 | PLN02506 | 0 | 34 | 526 | 498 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ21124.1 | 0 | 18 | 528 | 12 | 514 | pectinesterase [Fragaria x ananassa] |
GenBank | ABK92470.1 | 0 | 1 | 528 | 1 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 33 | 526 | 25 | 507 | pectin methylesterase 4 [Pyrus communis] |
Swiss-Prot | Q43062 | 0 | 33 | 528 | 37 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 9 | 528 | 1 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 212 | 526 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 212 | 526 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 9e-25 | 211 | 517 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 9e-25 | 211 | 517 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-24 | 211 | 517 | 1 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |