y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G134700.1 |
Family | CE8 |
Protein Properties | Length: 596 Molecular Weight: 66340.8 Isoelectric Point: 9.5223 |
Chromosome | Chromosome/Scaffold: 06 Start: 11114725 End: 11116923 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 287 | 580 | 0 |
VTVAKDGSGDFKTISEALAAMPAKYEGRYVIFVKQGIYDETVTVTKKMVNITMYGDGSQKTIVTGNKNFADGVQTFRTATFAVLGEGFLCKAMGFRNTAG PEKHQAVAIRVQADRAIFLNCRFEGYQDTLYAQTHRQFYRSCVITGTVDFIFGDAAAIFQNCLITVRKPLENQQNIVTAQGRIDGHETTGIVLQNCRIEP DKGLVPVKTKIRSYLGRPWKEFSRTVIMDSTIGDFIHPDGWLPWQGDFGLKTLYYAEYNNKGIGAQTNARIKWRGYHIIKKEEAMKFTVETFYQ |
Full Sequence |
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Protein Sequence Length: 596 Download |
MVFQDFDQLS ERRKLERQQK LRKKIIIGSV SSIAFFVIVG AGVFALVSNH NISSPGSNGG 60 SPSTVSQPVE SAKPTSHVAR VIKTVCNATT YQDTCQNTLE KGMRKDPSSV QPKDLLKIAI 120 KAADKEIEKV LKKASSFKFD KPREKAAFDD CLELIEDAKE ELKHCIDRVG NDIGKLTKNA 180 PDLNNWLSAV MSYQQTCIDG FPEGKLKSDM EKTFKAAREL TSNSLAMVSS LASFLKNFSF 240 SGTLNRRLLA EEYNSPSLDK DGLPGWTSHE DRRILKGANQ DKPKPHVTVA KDGSGDFKTI 300 SEALAAMPAK YEGRYVIFVK QGIYDETVTV TKKMVNITMY GDGSQKTIVT GNKNFADGVQ 360 TFRTATFAVL GEGFLCKAMG FRNTAGPEKH QAVAIRVQAD RAIFLNCRFE GYQDTLYAQT 420 HRQFYRSCVI TGTVDFIFGD AAAIFQNCLI TVRKPLENQQ NIVTAQGRID GHETTGIVLQ 480 NCRIEPDKGL VPVKTKIRSY LGRPWKEFSR TVIMDSTIGD FIHPDGWLPW QGDFGLKTLY 540 YAEYNNKGIG AQTNARIKWR GYHIIKKEEA MKFTVETFYQ VDWISATGSP VRLGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-164 | 25 | 590 | 587 | + pectinesterase | ||
PLN02990 | PLN02990 | 2.0e-173 | 80 | 590 | 526 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 1.0e-178 | 25 | 595 | 576 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 1 | 595 | 595 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 286 | 582 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA89480.1 | 0 | 1 | 595 | 1 | 596 | pectin methylesterase [Salix gilgiana] |
RefSeq | XP_002273499.1 | 0 | 69 | 595 | 69 | 596 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324181.1 | 0 | 1 | 595 | 1 | 592 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326319.1 | 0 | 1 | 595 | 1 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516193.1 | 0 | 1 | 595 | 1 | 592 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 285 | 595 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 286 | 595 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 5e-24 | 297 | 551 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-24 | 297 | 551 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-24 | 297 | 551 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |