Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G134800.1 |
Family | CE8 |
Protein Properties | Length: 597 Molecular Weight: 66275.8 Isoelectric Point: 5.8869 |
Chromosome | Chromosome/Scaffold: 06 Start: 11122144 End: 11124040 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 290 | 581 | 0 |
LTVAKDGSGAFKTIREAVDSIPKNSKSRFVIYVKEGIYVENVKIEKQQWNFMMYGDGMNKTIISGSLNNVDGVTTFLSGTLIAEGRGFIAKDMGFKNTAG PQKEQAVAVRSSSDQSIFHRCSFDAYQDTLYTHSNRQFYRECRIIGTIDFIFGNAAAIFQNCTIQPRQPMEKQNNTITAQSRTDPNQNTGISIQQCQMTP FDNLTVPTFLGRPWRDHATTVIMESYIGDFLDPLGWIPWEPETDPPNTTFYAEYQNFGPGSAIDKRAGWLGVLPNITSDEAAKFTVEPFIQG |
Full Sequence |
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Protein Sequence Length: 597 Download |
MDPSHSFTSH SKVDEQAEQA FRRKARKRLI VIVVSAVVLV TIIICALVGT SVSADNKSNG 60 KNPSSQTSEA QYIRAMCNAT RYPDSCYSSM SSSLKASSND TNPNPDPKTL FLLSLQVSLI 120 ELTKLSSLPQ WIMSSNSFKN ETSDSLVQSA LHACEILFLD AIDQVNESMS SIQVGQGDKT 180 VFLTSKINDI RTRLSTAITD QDTCIAGLQD TAKHLILTDG VRYAMTNSTE FTSNSLAIAS 240 NLVKILDDQL GIPIHRKLLT VDHDLDMGFP SWVNKSDRRL LQQENPEPNL TVAKDGSGAF 300 KTIREAVDSI PKNSKSRFVI YVKEGIYVEN VKIEKQQWNF MMYGDGMNKT IISGSLNNVD 360 GVTTFLSGTL IAEGRGFIAK DMGFKNTAGP QKEQAVAVRS SSDQSIFHRC SFDAYQDTLY 420 THSNRQFYRE CRIIGTIDFI FGNAAAIFQN CTIQPRQPME KQNNTITAQS RTDPNQNTGI 480 SIQQCQMTPF DNLTVPTFLG RPWRDHATTV IMESYIGDFL DPLGWIPWEP ETDPPNTTFY 540 AEYQNFGPGS AIDKRAGWLG VLPNITSDEA AKFTVEPFIQ GRQWLVQANV FFQDTL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 3.0e-150 | 49 | 585 | 553 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-155 | 115 | 596 | 492 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-175 | 289 | 581 | 298 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 596 | 600 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 596 | 599 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265217.1 | 0 | 1 | 596 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 596 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326318.1 | 0 | 1 | 596 | 1 | 596 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516194.1 | 0 | 57 | 596 | 59 | 599 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002532945.1 | 0 | 1 | 596 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 289 | 596 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 288 | 585 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-22 | 289 | 554 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-22 | 289 | 554 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-22 | 289 | 554 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |