| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G135100.2 |
| Family | CE8 |
| Protein Properties | Length: 430 Molecular Weight: 46650.6 Isoelectric Point: 9.4854 |
| Chromosome | Chromosome/Scaffold: 06 Start: 11154681 End: 11158389 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 123 | 412 | 0 |
| AVVAKDGTGNYKTISEAINAAPGKRFVIYVKAGVYKEKIRSNKDGITLIGDGKYSTIIVGDDSVAGGSSMPGSATFTITGDDFIARDIGFQNTAGPGGEQ ALALHVASDHSVFYRCSIAGYQDTLYAVALRQFYRECDIFGTIDFIFGNAAAVFQSCNLVLRKPHGDSYNVILANGRDDPGQNTGFSVQSCRITASSDFS PVMHNYNSYLGRPWKQYSRTVVMESSIGDAISSRGWIEWPGEGSYAKSLYFAEYSNTGPGAGTSNRVKWPGFHVIGPSEATKFTVGNLIA | |||
| Full Sequence |
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| Protein Sequence Length: 430 Download |
| MSMSLKRLDQ SLLALKDSPR KNKHDIQTWL SAALTFQQAC KDSTDSLSLS GDLMPRISEK 60 MDYLSQLASN SLALVSRITH DYGTKLKNST KRRRAEEKSQ GFPKWVSAKD RKLLQTSTIK 120 ANAVVAKDGT GNYKTISEAI NAAPGKRFVI YVKAGVYKEK IRSNKDGITL IGDGKYSTII 180 VGDDSVAGGS SMPGSATFTI TGDDFIARDI GFQNTAGPGG EQALALHVAS DHSVFYRCSI 240 AGYQDTLYAV ALRQFYRECD IFGTIDFIFG NAAAVFQSCN LVLRKPHGDS YNVILANGRD 300 DPGQNTGFSV QSCRITASSD FSPVMHNYNS YLGRPWKQYS RTVVMESSIG DAISSRGWIE 360 WPGEGSYAKS LYFAEYSNTG PGAGTSNRVK WPGFHVIGPS EATKFTVGNL IAGTSWLPST 420 GVTFISGLQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02170 | PLN02170 | 2.0e-139 | 5 | 428 | 439 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 9.0e-145 | 4 | 428 | 438 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 9.0e-155 | 1 | 428 | 438 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-161 | 122 | 413 | 299 | + Pectinesterase. | ||
| PLN02698 | PLN02698 | 0 | 1 | 429 | 432 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24883.1 | 0 | 4 | 428 | 144 | 568 | unknown [Picea sitchensis] |
| RefSeq | NP_197586.1 | 0 | 1 | 407 | 116 | 489 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277293.1 | 0 | 1 | 429 | 81 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326314.1 | 0 | 200 | 429 | 7 | 236 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516196.1 | 0 | 18 | 429 | 114 | 527 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 119 | 428 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 115 | 428 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 1e-25 | 122 | 386 | 5 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-25 | 122 | 386 | 5 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-25 | 122 | 386 | 5 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CX636030 | 268 | 131 | 398 | 0 |
| EE255324 | 246 | 185 | 430 | 0 |
| CD574556 | 260 | 169 | 428 | 0 |
| DV134133 | 265 | 69 | 332 | 0 |
| EY663239 | 266 | 88 | 353 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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