| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G135100.3 |
| Family | CE8 |
| Protein Properties | Length: 304 Molecular Weight: 33399.3 Isoelectric Point: 9.7321 |
| Chromosome | Chromosome/Scaffold: 06 Start: 11154171 End: 11155911 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 227 | 302 | 1.2e-23 |
| AVVAKDGTGNYKTISEAINAAPGKRFVIYVKAGVYKEKIRSNKDGITLIGDGKYSTIIVGDDSVAGGSSMPGSATF | |||
| Full Sequence |
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| Protein Sequence Length: 304 Download |
| MGLLVLVVLW LLGYTLGGAS MSWAATHSFQ MQVQTQCSYT RYPGLCLQSL KEFQDHPLDI 60 MTALVNKTIS ETRLPNSYFE TLSSHLEAQE AERVLSVTDY CKNLMSMSLK RLDQSLLALK 120 DSPRKNKHDI QTWLSAALTF QQACKDSTDS LSLSGDLMPR ISEKMDYLSQ LASNSLALVS 180 RITHDYGTKL KNSTKRRRAE EKSQGFPKWV SAKDRKLLQT STIKANAVVA KDGTGNYKTI 240 SEAINAAPGK RFVIYVKAGV YKEKIRSNKD GITLIGDGKY STIIVGDDSV AGGSSMPGSA 300 TFS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 8.0e-35 | 33 | 302 | 297 | + pectinesterase | ||
| PLN02301 | PLN02301 | 2.0e-36 | 26 | 301 | 291 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 8.0e-39 | 25 | 303 | 296 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 9.0e-40 | 37 | 303 | 279 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02698 | PLN02698 | 1.0e-103 | 20 | 303 | 286 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24883.1 | 6.99949e-42 | 34 | 286 | 66 | 331 | unknown [Picea sitchensis] |
| RefSeq | NP_197586.1 | 0 | 28 | 303 | 30 | 279 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277293.1 | 0 | 28 | 303 | 4 | 249 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326315.1 | 0 | 25 | 303 | 25 | 303 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516196.1 | 0 | 3 | 303 | 1 | 297 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 1e-16 | 223 | 303 | 1 | 86 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0.00000000000002 | 219 | 301 | 1 | 88 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.006 | 226 | 292 | 32 | 100 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 2 | 24 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 17 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY302807 | 294 | 19 | 303 | 0 |
| DY299214 | 294 | 19 | 303 | 0 |
| DY266416 | 292 | 19 | 301 | 0 |
| CV885313 | 274 | 32 | 298 | 0 |
| FC886698 | 277 | 19 | 286 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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